DCAR_004119 | CarrotOmics Tripal4

Cds

>DCAR_004119cds ATGGCCGTGAAAACGAAAAGAAAGAAGACCACGGCGGCGGAGCTGCCGGA CGAAATCCTCCGGCACGAGATTCTCACACGACTCCCGATAAAATCAGCGG TACGCTTCAAATCCGTTTGTAAATTGTGGCTTTTCCTAATCTCTCAGCCC CAATTTGTATTTCAACACCTCACTTACAACTCCACTGAAAACCCTAATGC TCATGACCTTCTTATTGCTGACAAAGGCACCAAATTAGTAATTCTATCTC GATACAAGGAAACTAAGTTGCTCCCTTTCGATAATTTGTCGTTCTTGGTT GGCTCGATTAATGGGTTGGTTTGTTTGTATCGTGGAACGAATTTGTCGTT GTGGAATCCGGCTATTCATCAGTCGAAGGAGTTTAGGCTTCCCCCGGGTC ATTTTGGGGTGCCTGGGACTAGTCTCGGTTTGGCGTTTGATTGGGTAGGG AATGATTTTAAGGTGGTGGCGTTGTGCGCTGATTTGAGGTCTGCGTCGGT TTATTGTTCGGGTTTGGATGATTGGAGTCAGGTGTTTTTTGAGGAGGATT TGTTCCCCAAGACGGATTTTGAGGATTGTACTCCGCCGTTTATTGTCAAG GGGTGTCCTTATTGGACGCGGTCTAGATATGTGTATGAGACGAAGGCGCT TGTGCCTGGTCAAGAGTATACTGATTTGGTTGAGGTGTTTCTGAGTGTGG TGAAGTTTGATCCTCGGAATTATGAGTTTACTTTGTCGCCGGAGTATCAT TGGGATAAGGATGATATTGGAATTGAGTTTTGTCATCAGTTTGTGGATTT GAAGGATCGTGTTACTTTGATAGTGCATGACCAGAGAGCTGAGTGTTGTA TTGTGCAAATGTTTACAATGGATGGGGAGGAGGGGTGTAGTGTTTGGACT AAGAAGTGCATAGTAATGTTGGATTTTGAAACGCGAGGTATGTATGTGTC ATTGTCACAGGGTTTTAAGTTTGATGGTGAGCTTGTGTATCATGACAATG GTATGTTTGCCTGCATTGTTAGCGAAACAGAAGAAAACAAGCGCATTCGT GGTACGACTTCTACAGAATATCAAGTAACCTGCTATAGATATGCACCTAC TTTGTTCTTTATTCTAGGAATGAAGTCCGTCCACTTAAGAACTCAAACTC GTACACCTCATTGCCATAGGACTCCTCGACGATTAATCAGTTCATTGAGA GCCTCATCATTATCTTGCGATCATTAG

Locus_tag

DCAR_004119

Name

DCAR_004119

Organism

Daucus carota subsp. sativus

Pep

>DCAR_004119pep MAVKTKRKKTTAAELPDEILRHEILTRLPIKSAVRFKSVCKLWLFLISQP QFVFQHLTYNSTENPNAHDLLIADKGTKLVILSRYKETKLLPFDNLSFLV GSINGLVCLYRGTNLSLWNPAIHQSKEFRLPPGHFGVPGTSLGLAFDWVG NDFKVVALCADLRSASVYCSGLDDWSQVFFEEDLFPKTDFEDCTPPFIVK GCPYWTRSRYVYETKALVPGQEYTDLVEVFLSVVKFDPRNYEFTLSPEYH WDKDDIGIEFCHQFVDLKDRVTLIVHDQRAECCIVQMFTMDGEEGCSVWT KKCIVMLDFETRGMYVSLSQGFKFDGELVYHDNGMFACIVSETEENKRIR GTTSTEYQVTCYRYAPTLFFILGMKSVHLRTQTRTPHCHRTPRRLISSLR ASSLSCDH*

Sequence Coordinates

DCARv2_Chr1:44874370..44875597+

Type

gene

Unique Name

DCAR_004119.gene

Sequence Residues

ATGGCCGTGAAAACGAAAAGAAAGAAGACCACGGCGGCGGAGCTGCCGGA
CGAAATCCTCCGGCACGAGATTCTCACACGACTCCCGATAAAATCAGCGG
TACGCTTCAAATCCGTTTGTAAATTGTGGCTTTTCCTAATCTCTCAGCCC
CAATTTGTATTTCAACACCTCACTTACAACTCCACTGAAAACCCTAATGC
TCATGACCTTCTTATTGCTGACAAAGGCACCAAATTAGTAATTCTATCTC
GATACAAGGAAACTAAGTTGCTCCCTTTCGATAATTTGTCGTTCTTGGTT
GGCTCGATTAATGGGTTGGTTTGTTTGTATCGTGGAACGAATTTGTCGTT
GTGGAATCCGGCTATTCATCAGTCGAAGGAGTTTAGGCTTCCCCCGGGTC
ATTTTGGGGTGCCTGGGACTAGTCTCGGTTTGGCGTTTGATTGGGTAGGG
AATGATTTTAAGGTGGTGGCGTTGTGCGCTGATTTGAGGTCTGCGTCGGT
TTATTGTTCGGGTTTGGATGATTGGAGTCAGGTGTTTTTTGAGGAGGATT
TGTTCCCCAAGACGGATTTTGAGGATTGTACTCCGCCGTTTATTGTCAAG
GGGTGTCCTTATTGGACGCGGTCTAGATATGTGTATGAGACGAAGGCGCT
TGTGCCTGGTCAAGAGTATACTGATTTGGTTGAGGTGTTTCTGAGTGTGG
TGAAGTTTGATCCTCGGAATTATGAGTTTACTTTGTCGCCGGAGTATCAT
TGGGATAAGGATGATATTGGAATTGAGTTTTGTCATCAGTTTGTGGATTT
GAAGGATCGTGTTACTTTGATAGTGCATGACCAGAGAGCTGAGTGTTGTA
TTGTGCAAATGTTTACAATGGATGGGGAGGAGGGGTGTAGTGTTTGGACT
AAGAAGTGCATAGTAATGTTGGATTTTGAAACGCGAGGTATGTATGTGTC
ATTGTCACAGGGTTTTAAGTTTGATGGTGAGCTTGTGTATCATGACAATG
GTATGTTTGCCTGCATTGTTAGCGAAACAGAAGAAAACAAGCGCATTCGT
GGTACGACTTCTACAGAATATCAAGTAACCTGCTATAGATATGCACCTAC
TTTGTTCTTTATTCTAGGAATGAAGTCCGTCCACTTAAGAACTCAAACTC
GTACACCTCATTGCCATAGGACTCCTCGACGATTAATCAGTTCATTGAGA
GCCTCATCATTATCTTGCGATCATTAG

Sequence Length

1227

Sequence MD5 Checksum

e2720d0ee6ff038df7e028bab7bb8b89

Relationship

The mRNA DCAR_004119 is a part of Gene DCAR_004119
The Genetic Marker MK003374 K0818 is located in Gene DCAR_004119

Database Reference Annotations

GFF_source:.

Publication

Iorizzo M, Ellison S, Senalik D, Zeng P, Satapoomin P, Huang J, Bowman M, Iovene M, Sanseverino W, Cavagnaro P, Yildiz M, Macko-Podgórni A, Moranska E, Grzebelus E, Grzebelus D, Ashrafi H, Zheng Z, Cheng S, Spooner D, Van Deynze A, Simon P. A high-quality carrot genome assembly provides new insights into carotenoid accumulation and asterid genome evolution.. Nature genetics. 2016 06; 48(6):657-66.

Analysis

Is Analysis

False

Is Obsolete

False