DCAR_000322 | CarrotOmics Tripal4

Cds

>DCAR_000322cds ATGTTCCAACTGAAAACTGATACTATTTGGGAACTATTTATTTCAGGCCC TGTCTCTGGAGGCTTGTATGGTGGAATATCAACAGGGGTTAAGGGGCCAT TTACTCCATCACAATGGATGGAGCTAGAACACCAAGCCTTAATCTACAAG TACATGACTGCAAATTATCCTGTGCCTTCTAACCTCCTCAACCCCATTAA GAAAGCAATGGAATCTGCTCGGTTCTCCAGTTCTTTGGGCGCAAATCTTA GACCAGTTGAATGGGGTGCTTTTCATCTGGGATTTCCTAACAATGCTGAT CCTGATCTTGGGAGATGTCGTCGGACAGATGGGAAAAAATGGCGCTGCTC ACGAGAGGCTGTCGCTGATCGAAAATATTGTGATCGACACACAAAAAGAT CCCGTTCAAGAAAGCCTGTGGAAGGTCAAACTGGCCATAACGTCTCTGGA ACCACCAATACCACCACAAAGAGTCCGCCTATGTCTTCTTCCACATCAGC TGCCTTGGTGGTTCCAGCTAGCGATACATTTAACAATTTTGGTCTCTCAG GAAACCGATTGCAACAAGGCACACCCAATCCCACCACATCCCCTCACCCT AAAAGGAGATCTGTTAATATCCATGAGGAAGTGAAAGAGATGGAAGGGCT TCCCATGAAACGTCCAGTCAATACTCTGAATGAAAGTGGGTTCTTAAATA TTAAACATATTCCATATCAAGAGTCTTCTACAATGGACTTTGGACTTCAA TGCTCCGACTCGATGCTAAACCCATTCCAGAAAGCTCCTTCATTGATCAA AGGCAAAAGCTATAGGTCTTCTGCAGAGCTTGATAAAGACAAATATAGAT CAGAGCATTCACTTGGACAGTTCATGGGTGACTGGATGAAATGCCAGTCT GAGCCCCAAGCTATCCCGTGGCCTGAGACTGATGCCCAACTAGACAGGAC CAGACTCTCCATATCATTACCAGTAGGTGCTGCAGATTTCATATCATCAA CTTCATCTCTTACCAATGAAAACCTTGTATGTTCACCCATAAGATTATCG TGCAATCTTGGCTCTGCTCATGCGGGTTCTGAAATGAATACATTCATCAA AGATACGAACCAAAGACATGCAAATTGGGGTACTTCTGCGGGTGGACCAC TCGGGGAAGTTTTGCATAGTTCCAATAATAGTGCAAGTGATTCCCAGAAC TCCATCAGTCCTTAA

Locus_tag

DCAR_000322

Name

DCAR_000322

Organism

Daucus carota subsp. sativus

Pep

>DCAR_000322pep MFQLKTDTIWELFISGPVSGGLYGGISTGVKGPFTPSQWMELEHQALIYK YMTANYPVPSNLLNPIKKAMESARFSSSLGANLRPVEWGAFHLGFPNNAD PDLGRCRRTDGKKWRCSREAVADRKYCDRHTKRSRSRKPVEGQTGHNVSG TTNTTTKSPPMSSSTSAALVVPASDTFNNFGLSGNRLQQGTPNPTTSPHP KRRSVNIHEEVKEMEGLPMKRPVNTLNESGFLNIKHIPYQESSTMDFGLQ CSDSMLNPFQKAPSLIKGKSYRSSAELDKDKYRSEHSLGQFMGDWMKCQS EPQAIPWPETDAQLDRTRLSISLPVGAADFISSTSSLTNENLVCSPIRLS CNLGSAHAGSEMNTFIKDTNQRHANWGTSAGGPLGEVLHSSNNSASDSQN SISP*

Sequence Coordinates

DCARv2_C10726352:756..3991+

Type

gene

Unique Name

DCAR_000322.gene

Sequence Residues

ATGTTCCAACTGAAAACTGATACTATTTGGGAACTATTTATTTCAGGCCC
TGTCTCTGGAGGCTTGTATGGTGGAATATCAACAGGGGTTAAGGGGCCAT
TTACTCCATCACAATGGATGGAGCTAGAACACCAAGCCTTAATCTACAAG
TACATGACTGCAAATTATCCTGTGCCTTCTAACCTCCTCAACCCCATTAA
GAAAGCAATGGAATCTGCTCGGTTCTCCAGTTCTTTGGGCGCAAATCTTA
GACCAGGTAAATTTGCATTGTGGTCTCATATTACCTCCATTTTGTCATTT
ATATGCACAGCAGTTTTCTACCTTCACTTTGTTATGTAGTTGGTCCGATG
TGGCAATTCGCCAGTTTGCTTGTTTCTCTTATTTTCTTGAACAATACCCA
CCATAAAATCAAGAAAACGGGTTCCTTGTCTCCAATCTTCTCCGCAGGAG
TCATGTTAAAAAAAGATATTGATTTTTTAGAATTCACTTAGAGAAATGTA
TTTTTAGAAAAGACGCCATCATCAGCCCTTTCCAGAGAAATGCTTGTGAG
GTGCTTATAGCCCTTCTGAGACACATAGTTCTGAGAACAGTGACGACCAC
CTTCCTATCAGACCTTAGTCCAACAATTTAGTAACTACCCCCAGTTCACT
CCACAACTCCTAACTCCACTCGTCTGTTTATTGCATCAATGGCAACATCT
AAATTAATTTTAATGGTACCTGCTGCCGGAAATGTGCAGCAAACTACCCC
ATTGCCAGCAACTCCTGACTTGAAGCTACCATGCCGAATATTAGCATCTT
GGAACTCATGGAGAAACAATAGAGCAATAGATTTGACCGGATTGCTGAGA
GCACTTCACTGTTCCATAACTTATGACTGTGTTGGCCTCCCACACTTTGG
GAGAGACTCTGAAATATGAAATAAACCCACTGCTCCCATTCGTTGACATT
AACCTCAACATTGGCAGCTTTCTAATACTCCTTTGCAAACTTGCAGTGCA
GTCTACAAAGATATGCATGTTATGCTTTACAACTGCTTTACACAGGACAT
ATTTATTCTCTATGAGAATACCTTTAAGGAATAGGTGCTCTCAAGTAGGG
AGAAGATTGTTAAAAAAATTTACTTTTAAGGGTGTATTACTGCTTTGCAC
ATTACACACTTTATGTAGAATTTCAACTTTCAAGATTTGATTATGAACAA
ACATTAAGGAACTATCGGGCTTCCTGCACTAAATCTACCTTTATAGTCTT
CCTATAGTTACACTAATGAAACATTAGTGCTAACCTTTAGTAAGATAACT
ACCTGAATGCCACATTGAAAGCAAAATGGATCTGATTATATTGCATCAGC
AATTCAAAGAAAAATAAAAGCTTCAGACCCTAAAATAATAAGACTATTCG
CACTGAATTTTAGTGCATAAAAATCATTGATCCAAGTGAAGAAAAGCGAA
TCGAAATTTCTGATGTTATAATTAAGCATAAATCCAAATTCTCACACATG
ATATAGATTTTATGCATTTTTAATACTGATTTCAGGTCATGTGACCACAT
GCATATATCTTAATTGATTGCGTTCATGTTCATCAAACAGTTGAATGGGG
TGCTTTTCATCTGGGATTTCCTAACAATGCTGATCCTGATCTTGGGAGAT
GTCGTCGGACAGATGGGAAAAAATGGCGCTGCTCACGAGAGGCTGTCGCT
GATCGAAAATATTGTGATCGACACACAAAAAGATCCCGTTCAAGAAAGCC
TGTGGAAGGTCAAACTGGCCATAACGTCTCTGGAACCACCAATACCACCA
CAAAGAGTCCGCCTATGTCTTCTTCCACATCAGCTGCCTTGGTGGTTCCA
GCTAGCGATACATTTAACAATTTTGGTCTCTCAGGAAACCGATTGCAACA
AGGCACACCCAATCCCACCACATCCCCTCACCCTAAAAGGTAAATACAGT
TCTTGCAATTATTTTTTCTGTTGTATTTTGCTATTTGCTTGTAGATTAAC
ATTCACTCTCTAGACTTAGCTTTACCTATATAAGCAACATAATCGAAACT
TATGTTACTCAGACTCTTTGGTTTCTGGCTTCTGCATTTGTGTCGACTCC
TTGCCTCCTTGGACACGATACTCATTTCATGTTATATTCACTTTGACCAA
CTGAAAGACCATATAATGAGATGTACTTGTGATGCAGAAAATAAAAGAGA
AAGAGAGAAGATCCCTTGGTATTATCCTAAAATTGGTGTTGATAATAGAA
GTCCAACATAATTAGTTTCAAGAAAAACTAGTACCTGTAATCTGCTATTT
TAAAAAATCATGTATACTATGAGTATCATGTCTAATATCTGATAAGATAT
TGTATCCTTATAATGAGGTATCTATCAACAAATTGCGCGGAGTCTCTGTA
CATGTATCAGAAAATAGGTTATTTTCTCGTTTGGCCGGAATCCAATAGTC
AGATATGAATGTGTTCATACCTGAGTCTAAGCAACTTAGGCTTAAACTAC
ATATTAGCAATAATTTGTGTTCATATTTCAATTTGCAGCATTGCTTCACA
CTAAAACTTACATGAATATTAGTTCTTTTTGCTAGTCTTCTCAGTTGTCA
GACCTGAATAATTTTCTTCAAGCAGGAGATCTGTTAATATCCATGAGGAA
GTGAAAGAGATGGAAGGGCTTCCCATGAAACGTCCAGTCAATACTCTGAA
TGAAAGTGGGTTCTTAAATATTAAACATATTCCATATCAAGAGTCTTCTA
CAATGGACTTTGGACTTCAATGCTCCGACTCGATGCTAAACCCATTCCAG
AAAGCTCCTTCATTGATCAAAGGCAAAAGCTATAGGTCTTCTGCAGAGCT
TGATAAAGACAAATATAGATCAGAGCATTCACTTGGACAGTTCATGGGTG
ACTGGATGAAATGCCAGTCTGAGCCCCAAGCTATCCCGTGGCCTGAGACT
GATGCCCAACTAGACAGGACCAGACTCTCCATATCATTACCAGTAGGTGC
TGCAGATTTCATATCATCAACTTCATCTCTTACCAATGAAAACCTTGTAT
GTTCACCCATAAGATTATCGTGCAATCTTGGCTCTGCTCATGCGGGTTCT
GAAATGAATACATTCATCAAAGATACGAACCAAAGACATGCAAATTGGGG
TACTTCTGCGGGTGGACCACTCGGGGAAGTTTTGCATAGTTCCAATAATA
GTGCAAGTGATTCCCAGAACTCCATCAGTCCTTAA

Sequence Length

3235

Sequence MD5 Checksum

b121b50265e5f609352488425e26d761

Relationship

The mRNA DCAR_000322 is a part of Gene DCAR_000322

Database Reference Annotations

GFF_source:.

Publication

Iorizzo M, Ellison S, Senalik D, Zeng P, Satapoomin P, Huang J, Bowman M, Iovene M, Sanseverino W, Cavagnaro P, Yildiz M, Macko-Podgórni A, Moranska E, Grzebelus E, Grzebelus D, Ashrafi H, Zheng Z, Cheng S, Spooner D, Van Deynze A, Simon P. A high-quality carrot genome assembly provides new insights into carotenoid accumulation and asterid genome evolution.. Nature genetics. 2016 06; 48(6):657-66.

Analysis

Is Analysis

False

Is Obsolete

False