DCAR_000307 | CarrotOmics Tripal4

Cds

>DCAR_000307cds ATGCCGAATAACGTTAATTCGCCTCGGGATTCGCCTCGTGCGAGTCCGTC GCCGAGTGGGAGTCCGAGGATTGGGTTCACAGTGCCGGCGCACAAGCCGA AAAGGCCTTTGACGTCGGCGGAGATTATGAGGCAGCAGATGCAGGTGTCG GAACAGAGTGATAATAGGCTTCGGAAAACGCTCATGAGGACTCTTGTTGG CCAGACGGGGAGGAGAGCCGAGACCATAATCCTTCCTTTAGAGCTTCTCC GCCATTTAAAGCCATCAGAATTCAAGACCGGCGGAGAGTACCACCTATGG CAGAAGCGTCAACTAAAGCTTCTTGAGGCCGGACTACTTCTCCACCCTTC CATCCCAGTCGAAAAATCGAACAAATTTGCCATGAAATTGAACGAAATCA TCACTTCCTCCGAAATCAAGCCTATAGACACTGGCAAAAACTCTGAACAA ATGAAAACTCTCTGCAATTGCATTGCAGCCTTAGCATGGCGGACCTCGGA CAATGAATCCCCCACAGACGCTTGCCATTGGGCTGACGGTTATCCACTCA ATGTGCACATCTACATTGCCCTGCTCCGGACTATATTTGACACCAAGGAC CAGACTATGGTCCTTGATGAGGTCGATGAGCTCGTCGAGCTGATGAAAAA GACATGGTCTACATTGGGGATTAACAAGTTAGTGCACAATATGTGCTTCA CTTGGGTGCTATTCGAACAATATATTCTCACCAGAGAAGTTGAGATTGAC TTACTTGCAGCATCACTCGCTATGATGTCTGAAATTGCACATGATGTGAA GACAGTTGATCGCGAGACGGTGGTACATGTGAAAATGTTGAAGAGGGCTT TGTCTTCTATCAAGAGATGGTGTGAGAAAAAATTGCTGGATTATCATGCT AATTTTAATGAGTCAAGACTAGGGGTGATGGAGATACTATTGCCCTTGGC CTCTGCAGTAACAAAAATATCCGAGGAGGTTCCTGGTTACGCTACTCTAG TACAAGACGACGGGGATATAGCAACTGATCTAACTGGTAATAGAGTAGAT CTTTACATTCGATCATCTCTGAGAAATGCATTTGCAAAGATGTTAGATGA TGGTAACATGAGTAGTGACATAATTGAAGTACAAGACGTGACCGATGCAC TTCTTCAAATAGCGCAAGGGACACATGAGTTAGCAGCGAAGGAAAGGGAA ACCTACAGTTCAATACTGAAGAAATGGCACCCTGTTGCGGCTGGAGCTGC TGCAGTGACTCTTCATACCTGCTACGGAACCTTGTTGAAGCAGTACTTAA CTGGGACTTCACATTTGCTCTCGAATGAGGCCATTGAAATACTGCATACA GCGGGAAAGCTAGAAAAGTTTTTGGTCCAGATGGCAGTTGAGGATTCAGC TGAATGCTCGGATGGAGGGAAAGCTATTGTGAGGGAGATGGTTCCTTATG AAGTTGATGCTATTATAACGAGATCTCTGAAGCAATGGATACAAGAGAGG TTGAAAAGTGTTAAAGAGGCTCTCCAGACCGCCAAAGAGTCCGAGGTCAC TGCTCTTTCCTTTCACTTTATCTGGCATTAG

Locus_tag

DCAR_000307

Name

DCAR_000307

Organism

Daucus carota subsp. sativus

Pep

>DCAR_000307pep MPNNVNSPRDSPRASPSPSGSPRIGFTVPAHKPKRPLTSAEIMRQQMQVS EQSDNRLRKTLMRTLVGQTGRRAETIILPLELLRHLKPSEFKTGGEYHLW QKRQLKLLEAGLLLHPSIPVEKSNKFAMKLNEIITSSEIKPIDTGKNSEQ MKTLCNCIAALAWRTSDNESPTDACHWADGYPLNVHIYIALLRTIFDTKD QTMVLDEVDELVELMKKTWSTLGINKLVHNMCFTWVLFEQYILTREVEID LLAASLAMMSEIAHDVKTVDRETVVHVKMLKRALSSIKRWCEKKLLDYHA NFNESRLGVMEILLPLASAVTKISEEVPGYATLVQDDGDIATDLTGNRVD LYIRSSLRNAFAKMLDDGNMSSDIIEVQDVTDALLQIAQGTHELAAKERE TYSSILKKWHPVAAGAAAVTLHTCYGTLLKQYLTGTSHLLSNEAIEILHT AGKLEKFLVQMAVEDSAECSDGGKAIVREMVPYEVDAIITRSLKQWIQER LKSVKEALQTAKESEVTALSFHFIWH*

Sequence Coordinates

DCARv2_C10722422:63..2241+

Type

gene

Unique Name

DCAR_000307.gene

Sequence Residues

ATGCCGAATAACGTTAATTCGCCTCGGGATTCGCCTCGTGCGAGTCCGTC
GCCGAGTGGGAGTCCGAGGATTGGGTTCACAGTGCCGGCGCACAAGCCGA
AAAGGCCTTTGACGTCGGCGGAGATTATGAGGCAGCAGATGCAGGTGTCG
GAACAGAGTGATAATAGGCTTCGGAAAACGCTCATGAGGACTCTTGTTGG
CCAGGTACGTATCACATGCATGCATTGGGTTAGCTCTCGTCTGTTTGGCT
GAGCTTATAACTTATGAGTTAACGTGAATTATGACGTAACGTGACTTATG
TGATAACTTACGAGCTCAAACTCATAAGTTTTTTTAAAAGAGTACGTAAA
ACTACGTAAAACTAACTTTTAGCTTTAAGTCAGTTACGGTCTTATTTTTT
ATTTTAAGCCGCTTCTGACTTGTTACAGATATTTTTTAGCTTAAAGTTGA
AAATTACTTAAAATTCGGGCTAATGCGGTCATTATTAACATAAATGTGAT
CAATGTATATTATTTGCAGACGGGGAGGAGAGCCGAGACCATAATCCTTC
CTTTAGAGCTTCTCCGCCATTTAAAGCCATCAGAATTCAAGACCGGCGGA
GAGTACCACCTATGGCAGAAGCGTCAACTAAAGCTTCTTGAGGCCGGACT
ACTTCTCCACCCTTCCATCCCAGTCGAAAAATCGAACAAATTTGCCATGA
AATTGAACGAAATCATCACTTCCTCCGAAATCAAGCCTATAGACACTGGC
AAAAACTCTGAACAAATGAAAACTCTCTGCAATTGCATTGCAGCCTTAGC
ATGGCGGACCTCGGACAATGAATCCCCCACAGACGCTTGCCATTGGGCTG
ACGGTTATCCACTCAATGTGCACATCTACATTGCCCTGCTCCGGACTATA
TTTGACACCAAGGACCAGACTATGGTCCTTGATGAGGTCGATGAGCTCGT
CGAGCTGATGAAAAAGACATGGTCTACATTGGGGATTAACAAGTTAGTGC
ACAATATGTGCTTCACTTGGGTGCTATTCGAACAATATATTCTCACCAGA
GAAGTTGAGATTGACTTACTTGCAGCATCACTCGCTATGATGTCTGAAAT
TGCACATGATGTGAAGACAGTTGATCGCGAGACGGTGGTACATGTGAAAA
TGTTGAAGAGGGCTTTGTCTTCTATCAAGAGATGGTGTGAGAAAAAATTG
CTGGATTATCATGCTAATTTTAATGAGTCAAGACTAGGGGTGATGGAGAT
ACTATTGCCCTTGGCCTCTGCAGTAACAAAAATATCCGAGGAGGTTCCTG
GTTACGCTACTCTAGTACAAGACGACGGGGATATAGCAACTGATCTAACT
GGTAATAGAGTAGATCTTTACATTCGATCATCTCTGAGAAATGCATTTGC
AAAGGTAACTCACAGTACCGCAAGTTTGCAGTTTAATTTTCTGAATTTTG
ATTTTTTCTTACCAGGTCACGTTCTATGGAGAACACGTTTTAGTGTGAGA
ACACTGAGAACACTATTGTTCTGCTGCAGAACAATACAACATTAAAAAAT
TAAATAACTGCAAAACAGTTGTTCTGGACTTTTCAGAAAGTGCAAAACAA
CTGTTCTCATTGTTCTCGCAACCAAACTGTTCTCACTTGAATCGCTGTCT
TTTCTTACCATTTTTCTCTTGTTTCGTATATCAAAGATGTTAGATGATGG
TAACATGAGTAGTGACATAATTGAAGTACAAGACGTGACCGATGCACTTC
TTCAAATAGCGCAAGGGACACATGAGTTAGCAGCGAAGGAAAGGGAAACC
TACAGTTCAATACTGAAGAAATGGCACCCTGTTGCGGCTGGAGCTGCTGC
AGTGACTCTTCATACCTGCTACGGAACCTTGTTGAAGCAGTACTTAACTG
GGACTTCACATTTGCTCTCGAATGAGGCCATTGAAATACTGCATACAGCG
GGAAAGCTAGAAAAGTTTTTGGTCCAGATGGCAGTTGAGGATTCAGCTGA
ATGCTCGGATGGAGGGAAAGCTATTGTGAGGGAGATGGTTCCTTATGAAG
TTGATGCTATTATAACGAGATCTCTGAAGCAATGGATACAAGAGAGGTTG
AAAAGTGTTAAAGAGGCTCTCCAGACCGCCAAAGAGTCCGAGGTCACTGC
TCTTTCCTTTCACTTTATCTGGCATTAG

Sequence Length

2178

Sequence MD5 Checksum

b08cd0bb9a180ed72656e71ea53ff289

Relationship

The mRNA DCAR_000307 is a part of Gene DCAR_000307

Database Reference Annotations

GFF_source:.

Publication

Iorizzo M, Ellison S, Senalik D, Zeng P, Satapoomin P, Huang J, Bowman M, Iovene M, Sanseverino W, Cavagnaro P, Yildiz M, Macko-Podgórni A, Moranska E, Grzebelus E, Grzebelus D, Ashrafi H, Zheng Z, Cheng S, Spooner D, Van Deynze A, Simon P. A high-quality carrot genome assembly provides new insights into carotenoid accumulation and asterid genome evolution.. Nature genetics. 2016 06; 48(6):657-66.

Analysis

Is Analysis

False

Is Obsolete

False