DCAR_000272 | CarrotOmics Tripal4

Cds

>DCAR_000272cds ATGTCAACATCATCATCAGATACCGAATTCGGAAAATTGACTGCTGTCCA GAAATCAAACAGGGACCACATGTTGAAAATATTCAACAATCTTGACAGCA ACAATCTTGTGGTGACATACATGCCATCTCATCGACCAAAATCTGGTCGT GGTCTCACCCTTGATTTGGTGTATGCAGAAGATGGTTTCAATATCCATAC ATTGACGCCCTCTGCACATAACCAAACTCCTGACGAGATTACTGTTCAAG GGATTCGAACCACAAACGAATTCAATATGAAACACCTCGAGCCTCCCAAG GTCAATCCTGAACTCGAAGAAGAATTGAAGAAATATTGGCGCTCTTTGCG GAAAGGATGGTCATATAAGAGACATCTAAAGTATCAGGCCGATAAGCATC TCAAGTATAATCAGTTGCAAGACGAGGATGTTTTTGAAGTTGGGCTGATT CTTGGCAAGGAATTGGTATCTGAAGAGGGTAAAAATTTTCTGATGAGAAT TTTAGAAAAATATGAATATTATGCTGGGCAGATTTATTCTTGCAGGAAAT TTAGTGATGACCTTGAAAAAGAAATTGGTGGAGTTAAGGTGACATTTCGC CCTCATCCTGATGGACTTGCTTTGAGGATAAAGTACCTCCACGAGATACA TGTGTTGTACGATAAAGAAGCAAAGCACAGAATCTTAGGAAGCCGCCGAC AGTCGTTTCAACAGAGTGATGTTTTCTTGTTGGAAGATCTCCGAGTGAGA CGGAAGACTACTATGTTTTCTTGTTAG

Locus_tag

DCAR_000272

Name

DCAR_000272

Organism

Daucus carota subsp. sativus

Pep

>DCAR_000272pep MSTSSSDTEFGKLTAVQKSNRDHMLKIFNNLDSNNLVVTYMPSHRPKSGR GLTLDLVYAEDGFNIHTLTPSAHNQTPDEITVQGIRTTNEFNMKHLEPPK VNPELEEELKKYWRSLRKGWSYKRHLKYQADKHLKYNQLQDEDVFEVGLI LGKELVSEEGKNFLMRILEKYEYYAGQIYSCRKFSDDLEKEIGGVKVTFR PHPDGLALRIKYLHEIHVLYDKEAKHRILGSRRQSFQQSDVFLLEDLRVR RKTTMFSC*

Sequence Coordinates

DCARv2_C10712674:603..2101-

Type

gene

Unique Name

DCAR_000272.gene

Sequence Residues

ATGTCAACATCATCATCAGATACCGAATTCGGGTAAATATCTTAACCAAC
ACCTTGTTTAGTTATTTGTATTTGACATGACACTATTAGTTTTCCTTATA
TAAATTTATTTAGTTTATGATGCTAGATGTGTCTTCTTTTAATGAAGTTG
AACATATATACTCATTTGTTCAGATTTAGGACTAAATGTTGAGATTTGTA
GGTTAACATGAGACATGTGATATTTATAAGGAATTTTCTATGGTGTGCCC
AAGGGCATACATTAGTCACTAAGTCTAATGAAAATGGTAAATTTTGATTG
GTAGATGAATAATAAATGTTAATGGACCCCTACATTAACACCAATTCCAC
CGATAAAAAAAAGCTATTTTTATGAAAGTCGGTGCTTATTGTGTGCCCTT
GGACACACAGTAGAAATACCGTATTTATAAAGGATAGAAGAAGACTATCT
TTTCCACTTGACATATAGCCAGATAACCACTGCCCCAATAGCAAGTTAGA
AGCCCCACTTACAACCCCAAGTTATCCATTATGATTTGTGTCTTCACAGT
ATACATATTGATTAATATAGTTGTTGAAATTGTATTGTATTATGTGGATA
TCAGTCAGTCTATATTTAATTGCAAATTAGTAATTTTGATGTTGAGTACT
AATAAATCTTTTTTTCTGATTTAATTCGCAGAAAATTGACTGCTGTCCAG
AAATCAAACAGGGACCACATGTTGAAAATATTCAACAATCTTGACAGCAA
CAATCTTGTGGTGACATACATGCCATCTCATCGACCAAAATCTGGTCGTG
GTCTCACCCTTGATTTGGTGTATGCAGAAGATGGTTTCAATATCCATACA
TTGACGCCCTCTGCACATAACCAAACTCCTGACGAGATTACTGTTCAAGG
GATTCGAACCACAAACGAATTCAATATGAAACACCTCGAGCCTCCCAAGG
TACTAAATTCAACAAATAAGAATTATAAGTTCAAATTTCATTTTTGTTTA
CTAAGCTTTTTGAAAAATTAGGTCAATCCTGAACTCGAAGAAGAATTGAA
GAAATATTGGCGCTCTTTGCGGAAAGGATGGTCATATAAGAGACATCTAA
AGTATCAGGCCGATAAGCATCTCAAGTATAATCAGTTGCAAGACGAGGAT
GTTTTTGAAGTTGGGCTGATTCTTGGCAAGGAATTGGTATCTGAAGAGGG
TAAAAATTTTCTGATGAGAATTTTAGAAAAATATGAATATTATGCTGGGC
AGATTTATTCTTGCAGGAAATTTAGTGATGACCTTGAAAAAGAAATTGGT
GGAGTTAAGGTGACATTTCGCCCTCATCCTGATGGACTTGCTTTGAGGAT
AAAGTACCTCCACGAGATACATGTGTTGTACGATAAAGAAGCAAAGCACA
GAATCTTAGGAAGCCGCCGACAGTCGTTTCAACAGAGTGATGTTTTCTTG
TTGGAAGATCTCCGAGTGAGACGGAAGACTACTATGTTTTCTTGTTAG

Sequence Length

1498

Sequence MD5 Checksum

0acac34c0896d6abb745e1e089b2594e

Relationship

The mRNA DCAR_000272 is a part of Gene DCAR_000272

Database Reference Annotations

GFF_source:.

Publication

Iorizzo M, Ellison S, Senalik D, Zeng P, Satapoomin P, Huang J, Bowman M, Iovene M, Sanseverino W, Cavagnaro P, Yildiz M, Macko-Podgórni A, Moranska E, Grzebelus E, Grzebelus D, Ashrafi H, Zheng Z, Cheng S, Spooner D, Van Deynze A, Simon P. A high-quality carrot genome assembly provides new insights into carotenoid accumulation and asterid genome evolution.. Nature genetics. 2016 06; 48(6):657-66.

Analysis

Is Analysis

False

Is Obsolete

False