DCAR_026879 | CarrotOmics Tripal4

Cds

>DCAR_026879cds ATGAGTAGCGATGAATCAGGCGATAGCTCCACATGGAGCAGGGAGCAGGA TGTAAAGTTTGAGAATGCTTTGGCCACTTATTCTGAAGATTTATCAGATC GATGGCAGAAAATTGCAGCCGATGTTCCCGGGAAAACAATAGAAGAGGTG AGACACCACTATGAGCTCCTTGTTGAAGATGTTAATCAGATTGAATCTGG CTGTGTGCCACTGCCTCGTTACAATTCTTCTTCAATTGGCTCAGTGGGCC AATCTGGAAATGAAGGAACAGGTAAGAAAGGTGGCAATTTTGGGCACTTA AACAGCGACTCAAATCACAATGGTAAAGCTTCAAAGTCTGAACAGGAGCG TCGCAAAGGGATTGCCTGGACAGAGGAAGAACACAGATTATTTCTTCTGG GTTTGGAGAAATATGGTAAAGGTGACTGGAGAAGTATATCCCGGAACTTT GTGGTAACAAGAACGCCTACACAAGTTGCGAGCCATGCTCAGAAGTACTT TATTCGTTTAAGCTCTATTAACAAAGATAGGAGACGATCAAGCATTCATG ATATTACTAATGTGAATAACGGTGAAGTGTCACCCCTAGCACCGATCACT GGTCAAACAAATGGTTCTTCTGCAGGAGGTTCGTCTGGAAAGCCAAGCAA ACAAACTCCTCAATCTCCATTAGTTGCCTCTGGAGTTGGCATGTATGGTG GAACTACTATAGGGCAGCCAGTAGGAGGATCTCTCGTCTCAGGGATGCCA GTAAATCTTCCCCAGCCAGCACACATGGCATACGGTATGAGGGCCCCAAC AGGACAAGTAGTTGGTGCCCCAGTGAACATGGGTACCATGGCATATTCTA TGCCACAAACTTCCGCTCAGAGGTGA

Locus_tag

DCAR_026879

Name

DCAR_026879

Organism

Daucus carota subsp. sativus

Pep

>DCAR_026879pep MSSDESGDSSTWSREQDVKFENALATYSEDLSDRWQKIAADVPGKTIEEV RHHYELLVEDVNQIESGCVPLPRYNSSSIGSVGQSGNEGTGKKGGNFGHL NSDSNHNGKASKSEQERRKGIAWTEEEHRLFLLGLEKYGKGDWRSISRNF VVTRTPTQVASHAQKYFIRLSSINKDRRRSSIHDITNVNNGEVSPLAPIT GQTNGSSAGGSSGKPSKQTPQSPLVASGVGMYGGTTIGQPVGGSLVSGMP VNLPQPAHMAYGMRAPTGQVVGAPVNMGTMAYSMPQTSAQR*

Sequence Coordinates

DCARv2_Chr8:27974581..27977765-

Type

gene

Unique Name

DCAR_026879.gene

Sequence Residues

ATGAGTAGCGATGAATCAGGCGATAGCTCCACATGGAGCAGGGAGCAGGA
TGTAAAGTTTGAGAATGCTTTGGCCACTTATTCTGAAGATTTATCAGATC
GATGGCAGAAAATTGCAGCCGATGTTCCCGGGAAAACAATAGAAGAGGTG
AGACACCACTATGAGCTCCTTGTTGAAGATGTTAATCAGATTGAATCTGG
CTGTGTGCCACTGCCTCGTTACAATTCTTCTTCAATTGGCTCAGTGGGCC
AATCTGGAAATGAAGGAACAGGTAAGAAAGGTGGCAATTTTGGGCACTTA
AACAGCGACTCAAATCACAATGGTAAAGCTTCAAAGTCTGAACAGGAGCG
TCGCAAAGGGATTGCCTGGACAGAGGAAGAACACAGGTAAATTATCGTTA
TTTAGTTTATGAAAATTTTGGCGTGATCTAATCTTACTTACTGTTGTCTC
ATTCAGAAATATGTGAGTCTTATTGTTGTCCTAACATAGAGAATAATGCC
TCTGTTGGTTGTGGTTAATCACATTACACGAGCTTTTGTGCAGCATAGTT
CCATCTTAGTTACTGTTGTCTCATTTAGAATATATGCGCGGCTTACTGTG
TTTGTCTGCCTAACATAGAGTATATGCCTCTGTTGGTTGTTGTTGATTAC
ATTACATGAGCTTTTGTGCAGCATAGTTTAGTCTTAAAAAAAATCTAAAA
CTTGGCACATATGCATCACTGCAAGTAATTATGTTTGATGGGACATCCAA
AAAAAGAAAAAGAATTATGTTTGATGTGTCCAGACCCTGTGGTCTGACTA
CTGTGGCTGGAAATTGGCTTTGAAAAGAGTGTTCTGAACTTGTAAATAAT
TAGCACTGTTTTATAACTTGGTTTTTTATGTATCAAGTTCTGAAAAACTG
TGATGTTTTTTTTTTCAATTGGTCTGTACTATAATATGAGAAAATAGCCT
GGAATCTTGGGTTCATACATTTTAATATATCTATGCAGTTACTTGAATAT
TTTTGTGATGCTACTCAGATTATTTACTTCCTGCAATGCTACTCTAATAT
AGAAATTGGCCTTTATATTTTGACATGCTTTGCTTCAAGCGTTCATGATC
ACTCTGCAGTCATACAGAACTATGCTTGCATGTAATTTACTAGGTTGCTT
TCTCTTTGAAATGAGTAGAAGATTATTTTTCCTGTTCCGTAATCCGTATC
CATGTATGTTTTAGTTCTCACATTGCATTCTATTAAATCTATTTGACCCG
CACCGTATTTAATTATCTTCCTTGCGCTAGAATTGCTGATTTCACTTGTA
TCTTACTGGGGACATTGTACTAGAGACTGGGAACTAGACACTTCATTGTA
TAATAATGCTTTTGAGTGTGGTCAACTATGCACCTTTTTGTTCTAAGCTG
CTCAACTGACTTCCATACATCTTGGTGACCGCATTTGCAAATCAGTGCTT
GTTAATACGTATAGATTGTAATAATTTTGAAGTCATCTTTTCTAGTATAA
GATACTGTATTCAGAATTGGTAGACGGAAAATTTGAAAAATGAGGCTAGA
ATTACGAATCCCATTTCTGATTGTCATACCTACCAATAACAAGCTGCTCT
AATAAAAACATATATTAAGCTTTGAAAAGACACCCACTCCTTCCCTTCGA
CTTTAAGCAAGGCTATTAGCCTATGAAATGTATGGAGAATGCTAGGTCTC
TATTGCCTTCCGATAAATTATTAGTATACAAGAACCCAACATGCTTGTGA
TTATAGATAAAATCAAAGTTCTGCATATCAAGTGGCTTGACCTGACCTTC
ATAATTTTTATTCTCTCAAGGGAAGAAGAAAAAAAGGTTGCTGCTTATAG
TTTAGGTTAATTCGAGCCAGGAAGTTTTGAATCAACTCTAAAATCAGGAC
TTGGAGGAATGTGAAAATATTACTTAAGGCAATACAAATATACTGTAGAC
AACAGGCAGAAGCCTTTTTTTGATGAATTTGTGGAGTGTAAATTTTGCTT
TTTGAAGTACTTGGGCTATTATAATGAAGGGACTTCAGATTGAAATGTGA
AAGATTCTAAAATTTTTGAAGCATTAATGTATTTACTGACAATAGGCACA
GCCTTTCCGTTTTGCAAGAAAAGGAACATTTAATTTTCACTTTCAGGCCA
TAAGATTTCTTAAAAGTTACCCAAATGTCAGTGTGCTCGTGTTACTTTTA
CTATTGGTTTCAGCTAACAAAATGTAACTGATAGAATAGATTATAATTTA
ATTATTATTTTAAGAAGGCTAGACTCTAGAGTGCTTTACAAACACTTGTT
GATGTTCAAAATTCTTTTATGTTTCACAGAATGGCCAATCCATTTTTGTC
TCTCCTTTTGGTAACTAAGAAGGGTATGTCTTTGAGTTTTAGCCCCAGCT
GATTCAAGTGCCCAAATGCTTGCAACACTTGAGGCTCCTGTCTCTCGATC
TCAAGTAGTAGTTTACATCTAATTAAATATCGGCAGTATATGCATCCAGT
CTCTATCTGTGCTATTATATTGGACCTATAAGAAATTTTCGCAGTCTTTA
AGAATGTAATCTTTCTGTAGTTTATTGCTGTCATAGCGCATAAGAGTTAT
AAGAATTATATAAGCTATATTTCTCTCCTTTGGAAAAGTGAAGCACTAAC
ACAACTTAAATTCTTTTTTTTTTCCCCTGCTTATTGCCAAACAGATTATT
TCTTCTGGGTTTGGAGAAATATGGTAAAGGTGACTGGAGAAGTATATCCC
GGAACTTTGTGGTAACAAGAACGCCTACACAAGTTGCGAGCCATGCTCAG
AAGTACTTTATTCGTTTAAGCTCTATTAACAAAGATAGGAGACGATCAAG
CATTCATGATATTACTAATGTGAATAACGGTGAAGTGTCACCCCTAGCAC
CGATCACTGGTCAAACAAATGGTTCTTCTGCAGGAGGTTCGTCTGGAAAG
CCAAGCAAACAAACTCCTCAATCTCCATTAGTTGCCTCTGGAGTTGGCAT
GTATGGTGGAACTACTATAGGGCAGCCAGTAGGAGGATCTCTCGTCTCAG
GGATGCCAGTAAATCTTCCCCAGCCAGCACACATGGCATACGGTATGAGG
GCCCCAACAGGACAAGTAGTTGGTGCCCCAGTGAACATGGGTACCATGGC
ATATTCTATGCCACAAACTTCCGCTCAGAGGTGA

Sequence Length

3184

Sequence MD5 Checksum

56e1760756218608d8930551890c0806

Relationship

The mRNA DCAR_026879 is a part of Gene DCAR_026879
The Genetic Marker MK002673 K0117 is adjacent to Gene DCAR_026879

Database Reference Annotations

GFF_source:.

Publication

Iorizzo M, Ellison S, Senalik D, Zeng P, Satapoomin P, Huang J, Bowman M, Iovene M, Sanseverino W, Cavagnaro P, Yildiz M, Macko-Podgórni A, Moranska E, Grzebelus E, Grzebelus D, Ashrafi H, Zheng Z, Cheng S, Spooner D, Van Deynze A, Simon P. A high-quality carrot genome assembly provides new insights into carotenoid accumulation and asterid genome evolution.. Nature genetics. 2016 06; 48(6):657-66.

Analysis

Is Analysis

False

Is Obsolete

False