DCAR_003156 | CarrotOmics Tripal4

Cds

>DCAR_003156cds ATGGATCTGTTGAAGCTCTTTCTTGCTCTTGCACTGCTTTCCAGAGGTAC ATTTGGAGCCACATTTACATTTGTAAACAGATGCGAGTACAAAGTCTGGC CCGGCATTCTTGCAAATGCAGGCACAGCCCCTCTCGAAAGCACCGGTTTT GAGCTAGCCCAGGACACTTCACGCTCTTTCCAAGCTCCAACCGGCTGGTC CGGCCGCTTCTGGGGTCGAACCGGCTGCAAATTCGACGGATCCGGTTCAG GCTCCTGCTCAACCGGAGATTGTGGGTCAGGCCAAGTAGAATGCAACGGC GCCGGAGCTTCACCGCCGGCCACCCTAGCTGAGTTCACACTTGGGACCGG CAGTCAAGACTTCTATGACGTCAGCTTGGTGGACGGGTACAACGTGGCCA TGATAATCGAAGGGAGCGGCGGGTCGGGTATGTGCGCTTCGACCGGGTGC GTCACGGATCTGAACCGGCAATGCCCGGCTGAGTTGAGAGTGAGTGAGGG CGACGCGTGTAAGAGTGCGTGTGAAGCGTTCGGGAGTCCAGAGTACTGTT GTAGCGGCGCGTATAATACACCGGCTACTTGTAAGCCGTCGGTTTATGCG GAGATGTTCAAGATGGCTTGTCCGAGATCTTACAGTTATGCTTATGATGA TCCAACCAGCACGTTCACTTGCACTGGCGCTGATTACACCGTCACGTTTT GCCCCAACATGCCTAGTCAAAAATCATCAAGAGAATCAGCACCAACAACC ACCATTCCAACACCAACAACAACAGTAGGTGACGCCACTCCTACAACAAC AACAAATGGTGATGGGTCATCATCAGTCACGGGTGGTGATGCAGGGTTAC AGTCAGGCACAATGGGTGGTTCGAGTACATCATCAGGGTCAGGAACTGAT GGTGCAGTGATGGCTGATGATGGGTCATGGCTAGCTGGTTTGGCCATGGG TGACTCCACAAGGAGGTAA

Locus_tag

DCAR_003156

Name

DCAR_003156

Organism

Daucus carota subsp. sativus

Pep

>DCAR_003156pep MDLLKLFLALALLSRGTFGATFTFVNRCEYKVWPGILANAGTAPLESTGF ELAQDTSRSFQAPTGWSGRFWGRTGCKFDGSGSGSCSTGDCGSGQVECNG AGASPPATLAEFTLGTGSQDFYDVSLVDGYNVAMIIEGSGGSGMCASTGC VTDLNRQCPAELRVSEGDACKSACEAFGSPEYCCSGAYNTPATCKPSVYA EMFKMACPRSYSYAYDDPTSTFTCTGADYTVTFCPNMPSQKSSRESAPTT TIPTPTTTVGDATPTTTTNGDGSSSVTGGDAGLQSGTMGGSSTSSGSGTD GAVMADDGSWLAGLAMGDSTRR*

Sequence Coordinates

DCARv2_Chr1:36331601..36333175+

Type

gene

Unique Name

DCAR_003156.gene

Sequence Residues

ATGGATCTGTTGAAGCTCTTTCTTGCTCTTGCACTGCTTTCCAGAGGTAA
ATTTTTTCATATTTACAGGACTAATTCTTGCTAGCTAGCTTTATATTTGT
CACATTTTTAATTAATTATTTCTTCAACTTGTTAATTACATTTGGTAAAT
GTATGCATAGGTACATTTGGAGCCACATTTACATTTGTAAACAGATGCGA
GTACAAAGTCTGGCCCGGCATTCTTGCAAATGCAGGCACAGCCCCTCTCG
AAAGCACCGGTTTTGAGCTAGCCCAGGACACTTCACGCTCTTTCCAAGCT
CCAACCGGCTGGTCCGGCCGCTTCTGGGGTCGAACCGGCTGCAAATTCGA
CGGATCCGGTTCAGGCTCCTGCTCAACCGGAGATTGTGGGTCAGGCCAAG
TAGAATGCAACGGCGCCGGAGCTTCACCGCCGGCCACCCTAGCTGAGTTC
ACACTTGGGACCGGCAGTCAAGACTTCTATGACGTCAGCTTGGTGGACGG
GTACAACGTGGCCATGATAATCGAAGGGAGCGGCGGGTCGGGTATGTGCG
CTTCGACCGGGTGCGTCACGGATCTGAACCGGCAATGCCCGGCTGAGTTG
AGAGTGAGTGAGGGCGACGCGTGTAAGAGTGCGTGTGAAGCGTTCGGGAG
TCCAGAGTACTGTTGTAGCGGCGCGTATAATACACCGGCTACTTGTAAGC
CGTCGGTTTATGCGGAGATGTTCAAGATGGCTTGTCCGAGATCTTACAGT
TATGCTTATGATGATCCAACCAGCACGTTCACTTGCACTGGCGCTGATTA
CACCGTCACGTTTTGCCCCAACATGCCTAGGTAACATATTTTATTTCTCC
AAATTTTTTATGTCCAGTTTTGTAGAGAACCATTCCATCTAAAACCTTAA
GGTGTTAGAGGAGGCCCCTTTATGGATCTTATGCTTATATTCAACACTCC
CCCTCACTCGAAATCCCATTATTTGGGTTGAAGAGTGGATCACGGGCGCC
CATCTTTGGAGCATAAATTGCCTTCGTGTCCATTTTAAATTGTGAGAATA
TTGGGGGTGGCAGGGGCTCGAACCCGAGACCTCCCGCAAACCTCGCTCTG
ATACCATGTAGAGAACCATTCCCTCTAAAACCTTAAGGTGTTAGAGGAGG
CCCCTTTATGGATCTTATGCTTATATTCAACAAGTTTATCTTTTTTGAAA
ACAATTGTATATTGACATTATTGATGTGTACAGTCAAAAATCATCAAGAG
AATCAGCACCAACAACCACCATTCCAACACCAACAACAACAGTAGGTGAC
GCCACTCCTACAACAACAACAAATGGTGATGGGTCATCATCAGTCACGGG
TGGTGATGCAGGGTTACAGTCAGGCACAATGGGTGGTTCGAGTACATCAT
CAGGGTCAGGAACTGATGGTGCAGTGATGGCTGATGATGGGTCATGGCTA
GCTGGTTTGGCCATGGGTGACTCCACAAGGAGTAATCATTTGCATTTCAC
TTTACATTTTCTCTTTATTGCATTGTGTTGTTTCAGCTTTTTGTTGTAAT
CTTTTTGCTTTTGTATTAGGGTAA

Sequence Length

1574

Sequence MD5 Checksum

51b687b123347cfd91fc5fb5c69bf0c7

Relationship

The mRNA DCAR_003156 is a part of Gene DCAR_003156
The Genetic Marker MK006044 K3488 is located in Gene DCAR_003156

Database Reference Annotations

GFF_source:.

Publication

Iorizzo M, Ellison S, Senalik D, Zeng P, Satapoomin P, Huang J, Bowman M, Iovene M, Sanseverino W, Cavagnaro P, Yildiz M, Macko-Podgórni A, Moranska E, Grzebelus E, Grzebelus D, Ashrafi H, Zheng Z, Cheng S, Spooner D, Van Deynze A, Simon P. A high-quality carrot genome assembly provides new insights into carotenoid accumulation and asterid genome evolution.. Nature genetics. 2016 06; 48(6):657-66.

Analysis

Is Analysis

False

Is Obsolete

False