DCAR_021706 | CarrotOmics Tripal4

Cds

>DCAR_021706cds ATGTATTCGGTTCGCAGTTTGTCTTCTCTGTTTATTAGAAAGGTCTATGC CAACAATATCAGACCGTTTTCCACGACTGCTAAGCGTGGCGGAGGGGAAG AAGAATGGAATGACACTTGGGAATCTGCTTGGCTCCCAGAAGACCTTTCT GCGAAGAACCGAGCTCCATGGGAAACCGACGTCAATTTCTCTATTGATAG TAACGATACTAGCAATTCTTCTTCAGTGATGCTTTCGCCTGAAGTTGATG CAGAGACCAAGGCATTCGTGGAGGACATGACAGATAATTGGGATCAAAGA AGGAGAAGCCCTAAATCACAACAAAAGCAGAAAGAATTCGAGAGTTCGAA TTCACTTTATAGTTTGGAGAATGTGAAGAAGGATTACAGGCTGAAGAAAC AGAGGATTCATGCTGCGTTATGGGCGAAAGAGATTGATAAGCAGGAAGAA GCCAAGTTGGGAGATTCTATGGGGGGAACTGGTGGAGATGATATTGAGAA GCTGCTTGATAGCTGCTCTGAGATTTTCGACTTCGCAAACACTGATCTGA GCAACTCAAAGACACCGGGTTTAAATGATATTAAAAGTAACCCCGATGGC TGGGAAACAACATCTAAAGCTCAAGATGGGAATATTTGGGAGATGTCGCA GAGGGAAGAAGACATTTTGCTCCAAGAATTCGAACGCCGGATTGCGTTCA GTAAATTCCAGATAGCAAGTTTTATCAAAACTCACATATTCAGCCGAAGG AGGCCTATTGATGGGTGGAAATACATGATAGAGGAACTGGGACCAAATGC AAAAAAAGGAAGAGGCAGTGTTTCCAGGTTGCCTAGTCTGTCTGATCCGT CAACCCAACCTTTCAAAGAAGAGAAGGCGCCGATTTCAGCTGCTATCCCA TCCCATAGAGGGAGGTAG

Locus_tag

DCAR_021706

Name

DCAR_021706

Organism

Daucus carota subsp. sativus

Pep

>DCAR_021706pep MYSVRSLSSLFIRKVYANNIRPFSTTAKRGGGEEEWNDTWESAWLPEDLS AKNRAPWETDVNFSIDSNDTSNSSSVMLSPEVDAETKAFVEDMTDNWDQR RRSPKSQQKQKEFESSNSLYSLENVKKDYRLKKQRIHAALWAKEIDKQEE AKLGDSMGGTGGDDIEKLLDSCSEIFDFANTDLSNSKTPGLNDIKSNPDG WETTSKAQDGNIWEMSQREEDILLQEFERRIAFSKFQIASFIKTHIFSRR RPIDGWKYMIEELGPNAKKGRGSVSRLPSLSDPSTQPFKEEKAPISAAIP SHRGR*

Sequence Coordinates

DCARv2_Chr6:20474571..20477194+

Type

gene

Unique Name

DCAR_021706.gene

Sequence Residues

CGAAAACCTAAGAAACGCACTGCACTTCATATACTTGTCAGCAATTTTAT
AGAAGGTGCCTTTAATTATTACGATATAATAGACAGTGGGTTCTTGTGCT
ATGTAATTAGGCCCGTCGCTAATTGACCCGTGTCGAGTCCAGTTAGTGTG
ATATATATATTTGTTCTTTTTCATAACTTGATTGGATTCAAATTAGGACT
AGGGTACTTATGCAAGGTTTAAGTTTTAGTTTTATTTATGTGTAGGTGAT
GTATTCGGTTCGCAGTTTGTCTTCTCTGTTTATTAGAAAGGTCTATGCCA
ACAATATCAGACCGTTTTCCACGACTGCTAAGCGTGGCGGAGGGGAAGAA
GAATGGAATGACACTTGGGAATCTGCTTGGCTCCCAGAAGACCTTTCTGC
GAAGAACCGAGCTCCATGGGAAACCGACGTCAATTTCTCTATTGATAGTA
ACGATACTAGCAATTCTTCTTCAGTGATGCTTTCGCCTGAAGTTGATGCA
GAGACCAAGGCATTCGTGGAGGACATGACAGATAATTGGGATCAAAGAAG
GAGAAGCCCTAAATCACAACAAAAGCAGAAAGAATTCGAGAGTTCGAATT
CACTTTATAGTTTGGAGAATGTGAAGAAGGATTACAGGCTGAAGAAACAG
AGGATTCATGCTGCGTTATGGGCGAAAGAGATTGATAAGCAGGAAGAAGC
CAAGTTGGGAGATTCTATGGGGGGAACTGGTGGAGATGATATTGAGAAGC
TGCTTGATAGCTGCTCTGAGTACGTTTTTTTTTTCCCTGCAATATTATGC
ATTCAACTTCCAAATCTAATTAGGCTGTGACTTGTTGTCTAGTGATTCTG
TCCGGTGTCTGTCACATGTGCTTGCTTTATTAAATTCTTGAAATGGTGTA
TGGTTAGATATCATGTTTAGTCTATCTTTATTGTCTGCAACAGGAAGAGT
TGATCAAATTAGGAAGCATATATGATCAAATTGTAGGAAAGAACATTTGA
ACGTTAATAAGGTTTTTTTAATGGGCGATTCTTGATGTGATAGTGTTAAG
TTATAACAAAGTAATATTGTCGACAGCATTTTTTTATGGGAGATTTTGAT
GTCACTCTGTGTATAGGATTTTCGACTTCGCAAACACTGATCTGAGCAAC
TCAAAGACACCGGGTTTAAATGATATTAAAAGTAACCCCGATGGCTGGGA
AACAACATCTAAAGCTCAAGATGGGAATATTTGGGAGATGTCGCAGAGGG
AAGAAGACATTTTGCTCCAAGAATTCGAACGCCGGATTGCGTTCAGTAAA
TTCCAGGTAATTCTTTCTCATGGACGATCACTTGCGTACTGTGCTGATTA
GTAAGATCTCAGTTAAAACTGCACTCTGTCCATGAGATATGCAGATTTCA
GCTATATCACATGTTAAGACGACTCCCGTAGTCTAATATATTCCAGCTTC
TCTTTAAGATGTTGCAACATTGCGACCTGATTTTGTGTTAATGTTGAGAC
AGACTGTTTATTGCTCCATTTATTGACCACTTTTTAACGCAATTGCCGTA
ATGACTTTATTCCTGCTAGCATTATTGGCTTGATCAGTAATTGGGATGAG
GGTAACTGTAACTGTGAACCTAACAAGTGTCTAACTAATTGTAAACTAGA
AAGTGTAATTTGATGGTCCTCCAGCAGAACCTTAGTTAAATGCTTCCATT
GTAATCATGACTGTTTTTTTTGAAAGATGTTTGGAGTAAAATAGTTATGT
TAGTTCCTCACTTCATTGTGTATATTGTTCAGAATTCTATGTGGTGCATA
AGATTTAAACTTGTTATTATTTTTCATTTTGGTTGATTAAATATCAATAT
ATGCTTAAAATTTTGACATAAATCTAGTGTTGGCTGTTTCTTATCAAGAT
ATTTCTTAGCATCAACTTTTGACTACCATATGATGACTCTGATCTTGCTT
GTTCTATATATGTTGGCCTATCAGATAGCAAGTTTTATCAAAACTCACAT
ATTCAGCCGAAGGAGGCCTATTGATGGGTGGAAATACATGATAGAGGAAC
TGGGACCAAATGCAAAAAAAGGAAGAGGCAGTGTTTCCAGGTTGCCTAGT
CTGTCTGATCCGTCAACCCAACCTTTCAAAGAAGAGAAGGCGCCGATTTC
AGCTGCTATCCCATCCCATAGAGGGAGGTAGTTTTATACTTCCTAATGTC
AGGGTTTGTTTCTTATTTCCAAGAGAACATTTAATTATAATAGAAATGTA
ACTGCTTTGGTTGGCGAGTGTGGCCATTATCAGCAGAATTTGATTTATCA
AATTAACCTGTATGTATAGCTTCCTCCCATTCTCATGCTTACAGACTTGT
AGCGGCTGCAAATCCATAAAGTCGACTGTGTGTTTGGAGATCTTTATGCT
CAGGAGTTGCTCATTGCCCCTGGACCAACTGCAAGCGTCTTTTGGTCTTG
GATGTTTGTAAACGAGTAGGTCTGGGTAAAAAGTGAATGTCCAAGTTAAG
CGTGTAACTTATATTGTTCTTCTGGTGAAACAAACATAACTTGGTCTACA
TGCTAAACTCCTGTATAGCTGTGAACTTAGAGTGTTCGAATAATTGCTAT
CTGCACTTTTTGTCGGTGCTTTA

Sequence Length

2623

Sequence MD5 Checksum

a89978b460e34e3f7d42596204e40a43

Relationship

The mRNA DCAR_021706 is a part of Gene DCAR_021706
The Genetic Marker MK002716 K0160 is located in Gene DCAR_021706

Database Reference Annotations

GFF_source:.

Publication

Iorizzo M, Ellison S, Senalik D, Zeng P, Satapoomin P, Huang J, Bowman M, Iovene M, Sanseverino W, Cavagnaro P, Yildiz M, Macko-Podgórni A, Moranska E, Grzebelus E, Grzebelus D, Ashrafi H, Zheng Z, Cheng S, Spooner D, Van Deynze A, Simon P. A high-quality carrot genome assembly provides new insights into carotenoid accumulation and asterid genome evolution.. Nature genetics. 2016 06; 48(6):657-66.

Analysis

Is Analysis

False

Is Obsolete

False