DCAR_012077 | CarrotOmics Tripal4

Cds

>DCAR_012077cds ATGGATGTCGCCGAGGACAACAACGTCATCGCGCCGTTCGTCGTCAAGAC TTATCAGATGGTCAATGATCCGACCACTGATAATCTCATCACCTGGGGAC GAGCCAACAATAGCTTCATCGTTGTTAACCCTCTTGATTTCTCTCAACGA CTCTTGCCTGTTTTCTTCAAGCACAACAACTTCTCGAGCTTCATCCGTCA ACTCAACACATACGGTTTTAAGAAGGTGGATCCAGATCGGTGGGAATTTG CGAACGAGTGGTTTCTACGAGGCCAAACGCAAATATTGAAGAACATAGCG CGAAAACGACATAATAAAAGCGGATTATATCCGCTTAACAAATACGACGA AGAGGAAGAAGAAGATTTATTAACGGAGATTTCGAGATTAAAGCAAGAGC AAAAGATATTAGACCTTGAAGTCGAGGGAATGACGAAAAGATTAGAAGCC ACCGAAAGGAGGCCGCAACAAATGATGGCGTTTCTATATAAAGTCGTCGA AGATCCCGAAATAATTTCTCGAATGATGCTCGATAAAGATCGAACACGGA GAATCGGAGAGAAAAAAAGAAGGCTAATGACGATATCTTCGTCGACAAAT TCATCGCATTCTTCGTCGGAAATGATGGCGACTACTTCGTTGAAGAGTGA AGAGGAGGAGGAGAGGGCCACGGTGGGGTCCATGTCGTCGTCGGAAGGGA GCTTCGACGGCCATTCTCCGTCGTCCGAGACGGTGTTACCGGCGTGGTTG ATGGGTCAGAGAAGGCAGCTGAGGATGATGGAAACGCAGCCTTTGGTTGC GCAAGCCGCGTACAACGGAGGAGGATATGCCGGTGTATCTCCGCCTGTTG ACGGCGGCGGCGGCGGTGATATGAGTTTCTTCGCCGGAAATTCTAGTCTA CTGCCCTATCCTTTCTCACTGCTGGGAGGTGAATTTTAG

Locus_tag

DCAR_012077

Name

DCAR_012077

Organism

Daucus carota subsp. sativus

Pep

>DCAR_012077pep MDVAEDNNVIAPFVVKTYQMVNDPTTDNLITWGRANNSFIVVNPLDFSQR LLPVFFKHNNFSSFIRQLNTYGFKKVDPDRWEFANEWFLRGQTQILKNIA RKRHNKSGLYPLNKYDEEEEEDLLTEISRLKQEQKILDLEVEGMTKRLEA TERRPQQMMAFLYKVVEDPEIISRMMLDKDRTRRIGEKKRRLMTISSSTN SSHSSSEMMATTSLKSEEEEERATVGSMSSSEGSFDGHSPSSETVLPAWL MGQRRQLRMMETQPLVAQAAYNGGGYAGVSPPVDGGGGGDMSFFAGNSSL LPYPFSLLGGEF*

Sequence Coordinates

DCARv2_Chr3:43579279..43580335-

Type

gene

Unique Name

DCAR_012077.gene

Sequence Residues

ATGGATGTCGCCGAGGACAACAACGTCATCGCGCCGTTCGTCGTCAAGAC
TTATCAGATGGTCAATGATCCGACCACTGATAATCTCATCACCTGGGGAC
GAGCCAACAATAGCTTCATCGTTGTTAACCCTCTTGATTTCTCTCAACGA
CTCTTGCCTGTTTTCTTCAAGCACAACAACTTCTCGAGCTTCATCCGTCA
ACTCAACACATACGTAATATCAGTGTTTTTATTTCTCGTTCCAGTATCAG
TGATTTTCTGTCACCATTTCAGTGACCACTTTGATATTTAATTTTAATTT
TTTTTTTCTGACGTGTTTTGGTTGGTTTAGGGTTTTAAGAAGGTGGATCC
AGATCGGTGGGAATTTGCGAACGAGTGGTTTCTACGAGGCCAAACGCAAA
TATTGAAGAACATAGCGCGAAAACGACATAATAAAAGCGGATTATATCCG
CTTAACAAATACGACGAAGAGGAAGAAGAAGATTTATTAACGGAGATTTC
GAGATTAAAGCAAGAGCAAAAGATATTAGACCTTGAAGTCGAGGGAATGA
CGAAAAGATTAGAAGCCACCGAAAGGAGGCCGCAACAAATGATGGCGTTT
CTATATAAAGTCGTCGAAGATCCCGAAATAATTTCTCGAATGATGCTCGA
TAAAGATCGAACACGGAGAATCGGAGAGAAAAAAAGAAGGCTAATGACGA
TATCTTCGTCGACAAATTCATCGCATTCTTCGTCGGAAATGATGGCGACT
ACTTCGTTGAAGAGTGAAGAGGAGGAGGAGAGGGCCACGGTGGGGTCCAT
GTCGTCGTCGGAAGGGAGCTTCGACGGCCATTCTCCGTCGTCCGAGACGG
TGTTACCGGCGTGGTTGATGGGTCAGAGAAGGCAGCTGAGGATGATGGAA
ACGCAGCCTTTGGTTGCGCAAGCCGCGTACAACGGAGGAGGATATGCCGG
TGTATCTCCGCCTGTTGACGGCGGCGGCGGCGGTGATATGAGTTTCTTCG
CCGGAAATTCTAGTCTACTGCCCTATCCTTTCTCACTGCTGGGAGGTGAA
TTTTAG

Sequence Length

1056

Sequence MD5 Checksum

30d14ed0f5f956383ba344a043160e41

Relationship

The mRNA DCAR_012077 is a part of Gene DCAR_012077
The Genetic Marker MK002272 ESSR-167 is located in Gene DCAR_012077
The Genetic Marker MK002736 K0180 is located in Gene DCAR_012077

Database Reference Annotations

GFF_source:.

Publication

Iorizzo M, Ellison S, Senalik D, Zeng P, Satapoomin P, Huang J, Bowman M, Iovene M, Sanseverino W, Cavagnaro P, Yildiz M, Macko-Podgórni A, Moranska E, Grzebelus E, Grzebelus D, Ashrafi H, Zheng Z, Cheng S, Spooner D, Van Deynze A, Simon P. A high-quality carrot genome assembly provides new insights into carotenoid accumulation and asterid genome evolution.. Nature genetics. 2016 06; 48(6):657-66.

Analysis

Is Analysis

False

Is Obsolete

False