DCARv2 Y2 Mapping Variants JBrowse VCF
Name
DCARv2 Y2 Mapping Variants JBrowse VCF
File Type
VCF
Description
78,850 SNP variants from the F4 population 74,146. This is the VCF file used for JBrowse. See the linked analysis below for further details.
Note that this set of 78,850 SNPs was submitted to dbSNP at NCBI under BioProject PRJNA348698, however dbSNP dropped support for non-human genomes after publication, and the variants were not archived, and are not available there.
File Location
| Download File Name | Available at | Size | MD5 |
|---|---|---|---|
| y2map.dcar.vcf.gz | CarrotOmics Tripal4 | 24658400 | ef21d5aad6c7a89699afcb98b2b98f05 |
| y2map.dcar.vcf.gz.tbi | CarrotOmics Tripal4 | 143202 | a5812d923a7d3aa044591a1d4275effc |
Relationship
The File Carrot Genome Assembly DCARv2 Sequence Original Naming Scheme is reference genome File DCARv2 Y2 Mapping Variants JBrowse VCF
Organism