Genome Assembly Search
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| 2011 Carrot EST Assembly | A de novo assembly of carrot ESTs from four genetic backgrounds using the Illumina platform and Sanger sequencing. Normalized cDNA libraries were constructed from four sources: two orange unrelated inbred lines of European origin… |
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| Carrot Genome Assembly DCARv2 | An orange, doubled-haploid, Nantes-type carrot (DH1) was used for genome sequencing. We used BAC end sequences and a newly developed linkage map with 2,075 markers to correct 135 scaffolds with one… |
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| Carrot Genome Assembly DH1 v3.0 | Pacific Bioscience, Oxford Nanopore, Illumina Paired-End (PE) and Hi-C sequencing data were used to develop an improved genome assembly and annotation of the doubled haploid orange Nantes-type carrot DH1, NCBI BioSample SAMN03216637. The new DH1… |
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| Chromosome-level genome assembly of Cnidium monnieri | Cnidium monnieri, a medicinal herb of the Cnidium genus and the Apiaceae family, is among the most important traditional Chinese medicines and is widely distributed in China. However, to date, no C. monnieri-related genomic… |
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| Daucus carota vT2T Genome; Chromosome level assembly | In this study, we assembled a 430.40 Mb high-quality gapless genome to the telomere-to-telomere (T2T) level of ‘Kurodagosun’ carrot. In total, 36,268 genes were identified and 34,961 of them were functionally annotated. The proportion of repeat… |
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| NCBI accession AY582139; Panax ginseng chloroplast, complete genome. | Assembly deposited as NCBI GenBank accession AY582139 View this assembly in JBrowse by visiting this page |
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| NCBI accession BK059532; TPA_asm: Angelica sinensis chloroplast, complete genome. | Assembly deposited as NCBI GenBank accession BK059532. Assembly method: IDBA v. 1.1.3 View this assembly in JBrowse by visiting this page |
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| NCBI accession BK059899; TPA_asm: Semenovia thomsonii chloroplast, complete genome. | Assembly deposited as NCBI GenBank accession BK059899. Assembly method: IDBA v. 1.3.1 View this assembly in JBrowse by visiting this page |
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| NCBI accession CM004358; Daucus carota subsp. sativus cultivar DH1 plastid, complete sequence, whole genome shotgun sequence. | Assembly deposited as NCBI GenBank accession CM004358 View this assembly in JBrowse by visiting this page |
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| NCBI accession DQ898156; Daucus carota chloroplast, complete genome. | Assembly deposited as NCBI GenBank accession DQ898156 View this assembly in JBrowse by visiting this page DNA was sheared by nebulization, size fractionated to 4–6 kb, linker ligated and cloned into pHOS2,… |
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| NCBI accession GU456628; Anthriscus cerefolium chloroplast, complete genome. | Assembly deposited as NCBI GenBank accession GU456628 View this assembly in JBrowse by visiting this page |
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| NCBI accession HM596070; Hydrocotyle verticillata chloroplast, complete genome. | Assembly deposited as NCBI GenBank accession HM596070 View this assembly in JBrowse by visiting this page |
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| NCBI accession HM596071; Tiedemannia filiformis subsp. greenmannii chloroplast, complete genome. | Assembly deposited as NCBI GenBank accession HM596071 View this assembly in JBrowse by visiting this page |
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| NCBI accession HM596072; Crithmum maritimum chloroplast, complete genome. | Assembly deposited as NCBI GenBank accession HM596072 View this assembly in JBrowse by visiting this page |
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| NCBI accession HM596073; Petroselinum crispum chloroplast, complete genome. | Assembly deposited as NCBI GenBank accession HM596073 View this assembly in JBrowse by visiting this page |
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| NCBI accession JN637765; Eleutherococcus senticosus chloroplast, complete genome. | Assembly deposited as NCBI GenBank accession JN637765 View this assembly in JBrowse by visiting this page |
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| NCBI accession JQ248574; Daucus carota subsp. sativus mitochondrion, complete genome. | Assembly deposited as NCBI GenBank accession JQ248574. Sequencing technology: 454; Illumina; Sanger. Assembly method: Newbler/gsAssembler 2.6 (20110517_1502); bb.454contignet version 1.0.3 View this assembly in JBrowse by visiting… |
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| NCBI accession KC456163; Aralia undulata chloroplast, complete genome. | Assembly deposited as NCBI GenBank accession KC456163. Sequencing technology: Illumina. Assembly method: SOAPdenovo v. 1.04 View this assembly in JBrowse by visiting this page |
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| NCBI accession KC456164; Brassaiopsis hainla chloroplast, complete genome. | Assembly deposited as NCBI GenBank accession KC456164. Sequencing technology: Illumina. Assembly method: SOAPdenovo v. 1.04 View this assembly in JBrowse by visiting this page |
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| NCBI accession KC456165; Metapanax delavayi chloroplast, complete genome. | Assembly deposited as NCBI GenBank accession KC456165. Sequencing technology: Illumina. Assembly method: SOAPdenovo v. 1.04 View this assembly in JBrowse by visiting this page |
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| NCBI accession KC456166; Schefflera delavayi chloroplast, complete genome. | Assembly deposited as NCBI GenBank accession KC456166. Sequencing technology: Illumina. Assembly method: SOAPdenovo v. 1.04 View this assembly in JBrowse by visiting this page |
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| NCBI accession KC456167; Kalopanax septemlobus chloroplast, complete genome. | Assembly deposited as NCBI GenBank accession KC456167. Sequencing technology: Illumina. Assembly method: SOAPdenovo v. 1.04 View this assembly in JBrowse by visiting this page |
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| NCBI accession KC686331; Panax ginseng isolate damaya chloroplast, complete genome. | Assembly deposited as NCBI GenBank accession KC686331 View this assembly in JBrowse by visiting this page |
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| NCBI accession KC686332; Panax ginseng isolate ermaya chloroplast, complete genome. | Assembly deposited as NCBI GenBank accession KC686332 View this assembly in JBrowse by visiting this page |
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| NCBI accession KC686333; Panax ginseng isolate gaolishen chloroplast, complete genome. | Assembly deposited as NCBI GenBank accession KC686333 View this assembly in JBrowse by visiting this page |