DCAR_001079 | CarrotOmics Tripal4

Cds

>DCAR_001079cds ATGGGGAGGTCACCTTGCTGCGAGAAAGCACACACCAACAAAGGAGCATG GACTAAAGAAGAAGACCAGCGTCTCGTAAATTATATCCGCCTCCATGGGG AGGGCTGCTGGCGCTCCCTCCCCACTTCTGCGGGGTTGTTGAGATGTGGG AAAAGCTGTAGATTGAGGTGGATCAATTATCTCCGTCCTGATCTTAAACG TGGGAATTTCACTGAAGATGAAGATGAGCTTATCATTAAGCTTCATAGCC TCCTGGGAAACAAGTGGTCTTTGATTGCTGCAAGATTGCCTGGAAGAACT GACAATGAGATCAAGAACTACTGGAACACACACATTAAGCGTAAACTCAT TAGCCGTGGCCTCGACCCTCAGAACCACCGGCCATTCGACTCCACAGCTG CCACCCCCACCGCAAGTGCCATAGCCATCACTTCTCTGGACTTCAGAAAA AATACCAGCAACAGCACTGTTCCATCGAAAATATTACCTAGCCAAAGTCT TGTACCCTTGCAAAACAATCAGCTTAATAGCATTTACAAGTTCAAAACCG AGTCACTTGAGGAAGGCAATTGCAGCAGCAGCACAACTGAGGAAACTCAG GAGTATTTTCGCAAAGAGCAGAACAAGCCGGTTCTTGATCTAGAGCTATC GATAGGACTTCCCATGACTCGGACTGATCAGAAGACGGAATCAGTGTGGC CCGAACTGAGGACGGTGAAGCCTCCCACCCAGGCTGCACCAAGGATGTGC CTGTGCTGGCAATTAGGCTTCCAGAATAAGGCAGGTGAATTTTGTAGTAA TTGCAGAAGCACAACTGCATTTTACAGTTATTGTTGA

Locus_tag

DCAR_001079

Name

DCAR_001079

Organism

Daucus carota subsp. sativus

Pep

>DCAR_001079pep MGRSPCCEKAHTNKGAWTKEEDQRLVNYIRLHGEGCWRSLPTSAGLLRCG KSCRLRWINYLRPDLKRGNFTEDEDELIIKLHSLLGNKWSLIAARLPGRT DNEIKNYWNTHIKRKLISRGLDPQNHRPFDSTAATPTASAIAITSLDFRK NTSNSTVPSKILPSQSLVPLQNNQLNSIYKFKTESLEEGNCSSSTTEETQ EYFRKEQNKPVLDLELSIGLPMTRTDQKTESVWPELRTVKPPTQAAPRMC LCWQLGFQNKAGEFCSNCRSTTAFYSYC*

Sequence Coordinates

DCARv2_Chr1:10216452..10217848-

Type

gene

Unique Name

DCAR_001079.gene

Sequence Residues

ATGGGGAGGTCACCTTGCTGCGAGAAAGCACACACCAACAAAGGAGCATG
GACTAAAGAAGAAGACCAGCGTCTCGTAAATTATATCCGCCTCCATGGGG
AGGGCTGCTGGCGCTCCCTCCCCACTTCTGCGGGTACGTCAAACTGTTCT
CACGTTAAAAACTGTTCTTATAATTTTTTTTTTTTTTTTTGGGACATATA
ATTAATTATTGTTGATATTTTTTGTACTTGAATAGGGTTGTTGAGATGTG
GGAAAAGCTGTAGATTGAGGTGGATCAATTATCTCCGTCCTGATCTTAAA
CGTGGGAATTTCACTGAAGATGAAGATGAGCTTATCATTAAGCTTCATAG
CCTCCTGGGAAACAAGTATGTTTAAATGTTTGATATAATTGAGAATAATA
TCATATACGACCCGAAACCCGAAATTATCATACAAGCTTGTTCATTTTCT
TTACATATCTGCTCACAAATAGGGTATGGTGGAATATTGTTGAAAAGAAA
ATTTGTATTTAGCCTTGATTTTTTACGGATTTAAAAGTCAATGAACAAAA
TTATTGTAGTGATTTTTGGACATTTGTTAGATTAATTTGAGTCAGAAAAG
GTACAGTCTGAACAATAATCTCTCTAGCCAGTAAGTTGTACAGACTACAA
TAATCATCAAAATTATTTGGTTCCCTCATCAGATAAACGTCGATTTTAGA
AATTTAAATATTCACACACACGTATTTGTTCTTGGAGTGGAAACAATCCT
CTTTTGAAAACAGTCTTCAGTGTTCATTTCTTTATTTGATAATTAATTCA
TTTAATTTTGTTTTCAATCTAGGTGGTCTTTGATTGCTGCAAGATTGCCT
GGAAGAACTGACAATGAGATCAAGAACTACTGGAACACACACATTAAGCG
TAAACTCATTAGCCGTGGCCTCGACCCTCAGAACCACCGGCCATTCGACT
CCACAGCTGCCACCCCCACCGCAAGTGCCATAGCCATCACTTCTCTGGAC
TTCAGAAAAAATACCAGCAACAGCACTGTTCCATCGAAAATATTACCTAG
CCAAAGTCTTGTACCCTTGCAAAACAATCAGCTTAATAGCATTTACAAGT
TCAAAACCGAGTCACTTGAGGAAGGCAATTGCAGCAGCAGCACAACTGAG
GAAACTCAGGAGTATTTTCGCAAAGAGCAGAACAAGCCGGTTCTTGATCT
AGAGCTATCGATAGGACTTCCCATGACTCGGACTGATCAGAAGACGGAAT
CAGTGTGGCCCGAACTGAGGACGGTGAAGCCTCCCACCCAGGCTGCACCA
AGGATGTGCCTGTGCTGGCAATTAGGCTTCCAGAATAAGGCAGGTGAATT
TTGTAGTAATTGCAGAAGCACAACTGCATTTTACAGTTATTGTTGA

Sequence Length

1396

Sequence MD5 Checksum

8f9b0d8ee9cac3d77f4e911d6da42cd3

Relationship

The DCAR_001079 is a part of Gene DCAR_001079
The Genetic Marker MK002765 K0209 is adjacent to Gene DCAR_001079

Database Reference Annotations

GFF_source:.

Publication

Iorizzo M, Ellison S, Senalik D, Zeng P, Satapoomin P, Huang J, Bowman M, Iovene M, Sanseverino W, Cavagnaro P, Yildiz M, Macko-Podgórni A, Moranska E, Grzebelus E, Grzebelus D, Ashrafi H, Zheng Z, Cheng S, Spooner D, Van Deynze A, Simon P. A high-quality carrot genome assembly provides new insights into carotenoid accumulation and asterid genome evolution.. Nature genetics. 2016 06; 48(6):657-66.

Analysis

Is Analysis

False

Is Obsolete

False