DCAR_000932 | CarrotOmics Tripal4

Cds

>DCAR_000932cds ATGCAACCACATTGCACTGGAGAGGCCTGCATTTGTTTTAAGGGTTGTTG CCTTAAACCATTTCCTGCACTGTCTGAGCCTCAAATCTCCGCCACGAGTT ACAGAACCACTTCCAGGCATGAATTTGCCGCGTCTACAGCCTCTTCTCTC TATCCTGATACCCAATTTACTAACCATGAAGCTATTCCTTCAGTTGAAGA ATCATTGTCCAATTTCACCAAAGCTTATCCGTTATACTTGGAAACATCTC AAGCTGATCAAATTCGAGGGAAGGAGTACTCTCATCTTTCTCATCCAGGC CATGTATGCCTTGATTACATAGGCCACGGTCTCTTTTCTTACGGGCAGCA ACAAGGCCATTATGGTGCAGTTTCAATTGCCTCTACATCATCACCCCCTT CTTCTTCGATGCAGGATTCTAGTGCTCCCTTCTTTGATATTTTAAACAAG TCCGGAGATTTGTATTCCCAGATAATGTATGGTGGCCAGGAATCAGAATT TGACTCCCTCATCCGGAAAAGAATCATGAGCTTTATGAACATTTCTGAGG ATGAGTATTCAATGGTTTTCACAGCCAATCAGTTGTCTGCTTTTAAGCTT TTATCGGGCTCATACCCCTTCCAGTCTGGAACAGATCTGCTCACCGTCTA TGATTATGATAATGAGGCCGTAGAGGCAATGATTGATTGCTCAAAGAAGA AAGGTGCACAGGTAACATCTGCTGAATTCTCATGGCCTAAAATGAGAATT CAGTCCACAAAACTTAGGAAGATGATAGTCACGAAAAGAAAGAACAAAAA GAGGGGACTATTTGTTTTTCCTCTTCAGTCTAAGATGACCGGCTCACGTT ATTCATATTTATGGATGAACACGGCACAAGAAAATGGTTGGCATGTTTTG CTTGATGCTTCTGCATTAGGAGCCAAGGAAATGGAGACTTTAGGCCTCTC TTTCTTTAAGCCAGACTTTCTTTTCTGTTCCTTTTACAAGATTTTCGGGG AAGACCCCTCTGGCTTTGGCTGCTTGTTTGTGAAAAAATCCAGTGCTTCA GTATTGAACAATTCCACTTCTACTGGTATGGGAATTGTCCGTCTCCTACC ATCTGTAAGACCATGTCAGTTTCTTGAAAAACTATCCAAGACTGATAAAC AGTCATCAGTATCTGAGCTAAAGGAAGAGACCTTGGCTTTGCCAAGTTCA TCCTCCATCTCGATGTCTTTCCAGCAGAATGAAGCAACCTATGAGCTGGA AGAAGCTTCAGATGCCAAGGATAGACAAAAGCAACCACCAGTGTCTGAAA TTGTTGAATTATCTGAAATCGTTGAACTAGATAAGCCCGTCAACACAGAC GAGCCACAGGACAAGGAAGATGGAGGTACTGTAAAGTCAGAGATGGAATT TAGGGGTTTAGATCACGCAGATTCACTGGGCCTGATACTGATCAGTTGCA GAGCAAAGTACCTAGTCAACTGGCTGGTAAACGCGCTGACGAGCCTTAAT CATCCAAATTCAGAGAACGCGCTTCCATTAGTTACAATATATGGACCTAA GGTAAGATTTGATCGAGGGCCAGCAGTGGCTTTCAATATGTTTGATTGGA AAGGCGAAAAGGTTGATCCTGCACTTGTACAAAAACTAGCTGACAGAAAC AACATTTCTCTTAGTTGCGGATTTCTGAAAAACATATACTTCTCGGACAT GCAAGATAATGAGAGAAATTTCCTAGAGAGCAAAAATCCTGAGCAGGCAG GAGCTTTAAGAAACAAAAAGGATAAATGCAAATTAGGAATATCTGTTATT ACAGTTTCGCTTGGCTTCCTGACAAACTTCGAAGATGTCTACAGGCTCTG GGAATTCGCCTCAAAATTCCTGGATGCAGACTTCGTGGAGAAAGAAAAAT GGAGGTACCTGGCTCTTAACCAAACAACTGTTGAGGTGTAA

Locus_tag

DCAR_000932

Name

DCAR_000932

Organism

Daucus carota subsp. sativus

Pep

>DCAR_000932pep MQPHCTGEACICFKGCCLKPFPALSEPQISATSYRTTSRHEFAASTASSL YPDTQFTNHEAIPSVEESLSNFTKAYPLYLETSQADQIRGKEYSHLSHPG HVCLDYIGHGLFSYGQQQGHYGAVSIASTSSPPSSSMQDSSAPFFDILNK SGDLYSQIMYGGQESEFDSLIRKRIMSFMNISEDEYSMVFTANQLSAFKL LSGSYPFQSGTDLLTVYDYDNEAVEAMIDCSKKKGAQVTSAEFSWPKMRI QSTKLRKMIVTKRKNKKRGLFVFPLQSKMTGSRYSYLWMNTAQENGWHVL LDASALGAKEMETLGLSFFKPDFLFCSFYKIFGEDPSGFGCLFVKKSSAS VLNNSTSTGMGIVRLLPSVRPCQFLEKLSKTDKQSSVSELKEETLALPSS SSISMSFQQNEATYELEEASDAKDRQKQPPVSEIVELSEIVELDKPVNTD EPQDKEDGGTVKSEMEFRGLDHADSLGLILISCRAKYLVNWLVNALTSLN HPNSENALPLVTIYGPKVRFDRGPAVAFNMFDWKGEKVDPALVQKLADRN NISLSCGFLKNIYFSDMQDNERNFLESKNPEQAGALRNKKDKCKLGISVI TVSLGFLTNFEDVYRLWEFASKFLDADFVEKEKWRYLALNQTTVEV*

Sequence Coordinates

DCARv2_Chr1:5951202..5953143+

Type

gene

Unique Name

DCAR_000932.gene

Sequence Residues

ATGCAACCACATTGCACTGGAGAGGCCTGCATTTGTTTTAAGGGTTGTTG
CCTTAAACCATTTCCTGCACTGTCTGAGCCTCAAATCTCCGCCACGAGTT
ACAGAACCACTTCCAGGCATGAATTTGCCGCGTCTACAGCCTCTTCTCTC
TATCCTGATACCCAATTTACTAACCATGAAGCTATTCCTTCAGTTGAAGA
ATCATTGTCCAATTTCACCAAAGCTTATCCGTTATACTTGGAAACATCTC
AAGCTGATCAAATTCGAGGGAAGGAGTACTCTCATCTTTCTCATCCAGGC
CATGTATGCCTTGATTACATAGGCCACGGTCTCTTTTCTTACGGGCAGCA
ACAAGGCCATTATGGTGCAGTTTCAATTGCCTCTACATCATCACCCCCTT
CTTCTTCGATGCAGGATTCTAGTGCTCCCTTCTTTGATATTTTAAACAAG
TCCGGAGATTTGTATTCCCAGATAATGTATGGTGGCCAGGAATCAGAATT
TGACTCCCTCATCCGGAAAAGAATCATGAGCTTTATGAACATTTCTGAGG
ATGAGTATTCAATGGTTTTCACAGCCAATCAGTTGTCTGCTTTTAAGCTT
TTATCGGGCTCATACCCCTTCCAGTCTGGAACAGATCTGCTCACCGTCTA
TGATTATGATAATGAGGCCGTAGAGGCAATGATTGATTGCTCAAAGAAGA
AAGGTGCACAGGTAACATCTGCTGAATTCTCATGGCCTAAAATGAGAATT
CAGTCCACAAAACTTAGGAAGATGATAGTCACGAAAAGAAAGAACAAAAA
GAGGGGACTATTTGTTTTTCCTCTTCAGTCTAAGATGACCGGCTCACGTT
ATTCATATTTATGGATGAACACGGCACAAGAAAATGGTTGGCATGTTTTG
CTTGATGCTTCTGCATTAGGAGCCAAGGAAATGGAGACTTTAGGCCTCTC
TTTCTTTAAGCCAGACTTTCTTTTCTGTTCCTTTTACAAGATTTTCGGGG
AAGACCCCTCTGGCTTTGGCTGCTTGTTTGTGAAAAAATCCAGTGCTTCA
GTATTGAACAATTCCACTTCTACTGGTATGGGAATTGTCCGTCTCCTACC
ATCTGTAAGACCATGTCAGTTTCTTGAAAAACTATCCAAGACTGATAAAC
AGTCATCAGTATCTGAGCTAAAGGAAGAGACCTTGGCTTTGCCAAGTTCA
TCCTCCATCTCGATGTCTTTCCAGCAGAATGAAGCAACCTATGAGCTGGA
AGAAGCTTCAGATGCCAAGGATAGACAAAAGCAACCACCAGTGTCTGAAA
TTGTTGAATTATCTGAAATCGTTGAACTAGATAAGCCCGTCAACACAGAC
GAGCCACAGGACAAGGAAGATGGAGGTACTGTAAAGTCAGAGATGGAATT
TAGGGGTTTAGATCACGCAGATTCACTGGGCCTGATACTGATCAGTTGCA
GAGCAAAGTACCTAGTCAACTGGCTGGTAAACGCGCTGACGAGCCTTAAT
CATCCAAATTCAGAGAACGCGCTTCCATTAGTTACAATATATGGACCTAA
GGTAAGATTTGATCGAGGGCCAGCAGTGGCTTTCAATATGTTTGATTGGA
AAGGCGAAAAGGTTGATCCTGCACTTGTACAAAAACTAGCTGACAGAAAC
AACATTTCTCTTAGTTGCGGATTTCTGAAAAACATATACTTCTCGGACAT
GCAAGATAATGAGAGAAATTTCCTAGAGAGCAAAAATCCTGAGCAGGCAG
GAGCTTTAAGAAACAAAAAGGATAAATGCAAATTAGGAATATCTGTTATT
ACAGTTTCGCTTGGCTTCCTGACAAACTTCGAAGATGTCTACAGGCTCTG
GGAATTCGCCTCAAAATTCCTGGATGCAGACTTCGTGGAGAAAGAAAAAT
GGAGGTACCTGGCTCTTAACCAAACAACTGTTGAGGTGTAA

Sequence Length

1941

Sequence MD5 Checksum

4f8d52152e38514b14482f7476c2dd98

Relationship

The mRNA DCAR_000932 is a part of Gene DCAR_000932
The Genetic Marker MK006282 K3726 is located in Gene DCAR_000932

Database Reference Annotations

GFF_source:.

Publication

Iorizzo M, Ellison S, Senalik D, Zeng P, Satapoomin P, Huang J, Bowman M, Iovene M, Sanseverino W, Cavagnaro P, Yildiz M, Macko-Podgórni A, Moranska E, Grzebelus E, Grzebelus D, Ashrafi H, Zheng Z, Cheng S, Spooner D, Van Deynze A, Simon P. A high-quality carrot genome assembly provides new insights into carotenoid accumulation and asterid genome evolution.. Nature genetics. 2016 06; 48(6):657-66.

Analysis

Is Analysis

False

Is Obsolete

False