DCAR_004776 | CarrotOmics Tripal4

Cds

>DCAR_004776cds ATGGAAGAGACACGTTCAGTTGCTACTCTAATCGAGTCAACTACTACTAA GATACAACAACTTCAGAAAGCATTTGCAGAGCTTGAAAGTCACCGAGCGG TTACACTTAACATGAAATGGCAACAACTGGAAGAACACTTTCATGGGCTA GAGAAGTCCTTAAAGAGGCGTTTTAATGATCTGGAAGGCCAAGAACAAGA GTATAAAAACAAAACGCTGAGAGCACGAGAAACATTGGTCAAGCGTGAAG CAGATATCATAGCCAAGGAACAAGCTTCACTGAACAGGCTTCAAGAAAAA AGAGATGCTGCGGTGTATGCTATCTCTTCTAAAACTACAGCAAAGCATAA AAAGCCATGCATAGAGCCTACTTTTGTGACAACTAAGAATCAATGTGGTA TTCTGTTGGTAGAAGAGAAACCACCTGATATCATGGCTTCTCAAGATAAC TCAAAAAGTATGAAAAAGTTCACACAGAATGTAAATGTGGAGGGGCAATC ATATCCACAGCTTGTGCGCTTGTGTCAAGCAAATGATTCTGAAGGACTCC ACAAGTTCATATCAGAAAACCGTAAGAACCTGGCTGCCATTAAAGAGGAG ATTCCGATTGCATTGAGCGCTTCTGCTGACCCAGCTAATTTGGTGCTGGA CTCACTCCAGGGATTTTACAGCATACAAGGGGCCCAGTTGGATGGGAAGA AGGATTCATATCTTCTAGGTTTACGTCGAACTTGTATAATGTTGATGGAG TGCCTTCGCCTTCTATTGGCAACTCTTGACATGGGCTCCTTTTCTTATGT AATCTCTGATGTAAAAGAAAGAGCCAAGGCTATTGCTGAAGAATGGCAAC CGAAGTTGGTCGACCTTGACTTGGATGCCAGCAACGGAAACTCGTTGGAG GCTCATGCATTCCTTCAGCTTATTGCTACATTTGGTATTAGCTCTGATTA TGATCAGGAAGTTTTATCTAAGATGATACCAATGGTTTCTCGTCGTCAGC AGACTGCTGACTTGTGCCGCTCCCTTGGGTTGTCCGAGAGAATGCCGGGA GTAATTGATGTCTTGGTCAGTAATGGAAGACAGATTGATGCAGTTAACCT AGCTTTTTCTTTTGAGCTTACAGAGAAGTACTCTCCAGTCTCATTACTTG AATCCTACTTGACAGAAGCAAAACAAACAACTTCACCATCGAAATCTGCA AACGCCTCGCCTACTGTACAGACTGAGGTCAACGAAAGGGAACTTGCTGC ACTCAAGGCTGTCATCAAGTGCATTGAGGATCACAGGCTTGAAAAGCAGT ATCCAATAGACCCTCTCCAGAAGCAGGTTCTCCAACTAGAGAAGGCCAAA GCAGACAAGAAAAGGGCGACAGAAGTTGCAAAACCTCAACCGAAAAGGCC CCGAGCAAATGGTACAGGGTCTGTGCCACGAACAGCTAATGTTGCTGCGG AGAGGAATTTCTATCCCAGGATGACTGATAGGTACCCTCAGTACGTGTAT GATAGACCATATGCTTACACTGGACCAACTGACAACCACATTCAGTCAGT TCTTGGTCCTGCTTCCTACAACCTTTCACCTGCTCATGGAAATTACTTTG CAAACGGCTACCAGTATCAGGCTCCGTATCTTCACTAG

Locus_tag

DCAR_004776

Name

DCAR_004776

Organism

Daucus carota subsp. sativus

Pep

>DCAR_004776pep MEETRSVATLIESTTTKIQQLQKAFAELESHRAVTLNMKWQQLEEHFHGL EKSLKRRFNDLEGQEQEYKNKTLRARETLVKREADIIAKEQASLNRLQEK RDAAVYAISSKTTAKHKKPCIEPTFVTTKNQCGILLVEEKPPDIMASQDN SKSMKKFTQNVNVEGQSYPQLVRLCQANDSEGLHKFISENRKNLAAIKEE IPIALSASADPANLVLDSLQGFYSIQGAQLDGKKDSYLLGLRRTCIMLME CLRLLLATLDMGSFSYVISDVKERAKAIAEEWQPKLVDLDLDASNGNSLE AHAFLQLIATFGISSDYDQEVLSKMIPMVSRRQQTADLCRSLGLSERMPG VIDVLVSNGRQIDAVNLAFSFELTEKYSPVSLLESYLTEAKQTTSPSKSA NASPTVQTEVNERELAALKAVIKCIEDHRLEKQYPIDPLQKQVLQLEKAK ADKKRATEVAKPQPKRPRANGTGSVPRTANVAAERNFYPRMTDRYPQYVY DRPYAYTGPTDNHIQSVLGPASYNLSPAHGNYFANGYQYQAPYLH*

Sequence Coordinates

DCARv2_Chr1:51149083..51151985-

Type

gene

Unique Name

DCAR_004776.gene

Sequence Residues

ATGGAAGAGACACGTTCAGTTGCTACTCTAATCGAGTCAACTACTACTAA
GATACAACAACTTCAGAAAGCATTTGCAGAGCTTGAAAGTCACCGAGCGG
TTACACTTAACATGAAATGGCAACAACTGGAAGAACACTTTCATGGGCTA
GAGAAGTCCTTAAAGAGGCGTTTTAATGATCTGGAAGGCCAAGAACAAGA
GTATAAAAACAAAACGCTGAGAGCACGAGAAACATTGGTCAAGCGTGAAG
CAGATATCATAGCCAAGGAACAAGCTTCACTGAACAGGCTTCAAGAAAAA
AGAGATGCTGCGGTGTATGCTATCTCTTCTAAAACTACAGCAAAGCATAA
AAAGCCATGCATAGAGCCTACTTTTGTGACAACTAAGAATCAATGTGGTA
TTCTGTTGGTAGAAGAGAAACCACCTGATATCATGGCTTCTCAAGATAAC
TCAAAAAGTATGAAAAAGTTCACACAGAATGTAAATGTGGAGGGGCAATC
ATATCCACAGCTTGTGCGCTTGTGTCAAGCAAATGATTCTGAAGGACTCC
ACAAGTTCATATCAGAAAACCGTAAGAACCTGGCTGCCATTAAAGAGGAG
ATTCCGATTGCATTGAGCGCTTCTGCTGACCCAGCTAATTTGGTGCTGGA
CTCACTCCAGGGATTTTACAGCATACAAGGGGCCCAGTTGGATGGGAAGA
AGGATTCATATCTTCTAGGTTTACGTCGAACTTGTATAATGTTGATGGAG
TGCCTTCGCCTTCTATTGGCAACTCTTGACATGGGCTCCTTTTCTTATGT
AATCTCTGATGTAAAAGAAAGAGCCAAGGCTATTGCTGAAGAATGGCAAC
CGAAGTTGGTCGACCTTGACTTGGATGCCAGCAACGGAAACTCGTTGGAG
GCTCATGCATTCCTTCAGCTTATTGCTACATTTGGTATTAGCTCTGATTA
TGATCAGGAAGTTTTATCTAAGATGATACCAATGGTTTCTCGTCGTCAGC
AGACTGCTGACTTGTGCCGCTCCCTTGGGTTGTCCGAGAGAATGCCGGGT
AGCTCTTTCAATGCACACTTTCCACTCTTCTGAGCTTCCATAATAATGTC
TGTTATATCATTTATCAGGAGAAATTAAAATGTCAATGCACTGTGAAGTT
CTTTCTTCTAAAGAGGGGTGATCTTAAAAAGCCTTTGAACCATGTCGTTT
AAAGGATTGCATAAGCTCTTATGTCTCACCCCTCAACTTTGCAATTCACT
GCACCTGTTTCTCTATGATGCCATAATCTTCTGATTACTCTAGATAGACC
CTTTAGTACCGCAGTATGAACATTACACAGTGTCAACACAAGAAAACATT
TAGAACTAGAGATTTTTGTTATGTGCTTTCCCTAGTATTCTTTGACAGTT
CTGTTAAGTTTTTTTTGTAGATCCTCTGTGCTTTAGCTTTTTTCGTGTTA
TAGTAAAATATATGAACCTCAAAGTTCTTATGCTTTTGATGTTTATCGTA
TCCCTTGTCAAGACTGACAAGCATTGTCTGCATTTCTAAAATTCTCAGGA
GTAATTGATGTCTTGGTCAGTAATGGAAGACAGATTGATGCAGTTAACCT
AGCTTTTTCTTTTGAGCTTACAGAGAAGTACTCTCCAGTCTCATTACTTG
AATCCTACTTGACAGAAGCAAAACAAACAACTTCACCATCGAAATCTGCA
AACGCCTCGCCTACTGTACAGGTTCTGAGACTAATCTTCTTTACCATTTA
CTTGTATTTCTCTTTCAGACCCTGTTTTTGTTTGAGTAATTGAGTTTATC
TATGTGATTAGGATTCCCGATTTTAAGGATACATCCTATTTTACATTTTC
TAGGACATGTCTATATATCGCTTGAATGGTGGAGGCTCTGTCTCACCAAT
ATTTATCACTATTTGAACTTCTTAAGTTACACCAGCTATCTTAGTATATT
TTGTATTCGGTATATTTTGTACATACCTATGATTATTGTTTCAAAGCTTT
GGCAGCAGGCCTACATCATCCGCTCTCACTTGGGCCCTGTGTTGTCCTAC
TTAAATTGCTTTTTTTGAGCTTATACCAAGACAGAGAACTTTGTCACCAT
AGAATAGTGAAAGGAAATGGAAAAGTTGTGCTTGTGTAGACCTTTTAATT
AGGGCTAAAAGATTTTTGCTTTTATGCTACAGCCTGAGCACTTTGTCACC
TGAGAAAAAGCTTAATATAAGTTTTCAGTTTCAAATGCAAGCACACTTAT
ATGACTAAATTTTATTTTCTCTAAAATATGTTTTAGTTCTTAAAAGATTG
CTAAAATACTTCTCCCATATTGTTCAATATTTGGTACTGTACATGTTATC
CATTTTGCAATGATCTTAGTTGCTCATTTCACCTTCCTTGAGGAGCATTA
GTATGTTTAACTTAATGGAGTTGTCTATAGGGTCTAGCAGATAATAATGT
AATTGTGATGATACTGGAAACATTTTTTCTTTCAGACTGAGGTCAACGAA
AGGGAACTTGCTGCACTCAAGGCTGTCATCAAGTGCATTGAGGATCACAG
GCTTGAAAAGCAGTATCCAATAGACCCTCTCCAGAAGCAGGTTCTCCAAC
TAGAGAAGGCCAAAGCAGACAAGAAAAGGGCGACAGAAGTTGCAAAACCT
CAACCGAAAAGGCCCCGAGCAAATGGTACAGGGTCTGTGCCACGAACAGC
TAATGTTGCTGCGGAGAGGAATTTCTATCCCAGGATGACTGATAGGTACC
CTCAGTACGTGTATGATAGACCATATGCTTACACTGGACCAACTGACAAC
CACATTCAGTCAGTTCTTGGTCCTGCTTCCTACAACCTTTCACCTGCTCA
TGGAAATTACTTTGCAAACGGCTACCAGTATCAGGCTCCGTATCTTCACT
AG

Sequence Length

2902

Sequence MD5 Checksum

a8dbb94f1f761b1bd60923fbd0265f06

Relationship

The mRNA DCAR_004776 is a part of Gene DCAR_004776
The Genetic Marker MK002438 K0025 is located in Gene DCAR_004776

Database Reference Annotations

GFF_source:.

Publication

Iorizzo M, Ellison S, Senalik D, Zeng P, Satapoomin P, Huang J, Bowman M, Iovene M, Sanseverino W, Cavagnaro P, Yildiz M, Macko-Podgórni A, Moranska E, Grzebelus E, Grzebelus D, Ashrafi H, Zheng Z, Cheng S, Spooner D, Van Deynze A, Simon P. A high-quality carrot genome assembly provides new insights into carotenoid accumulation and asterid genome evolution.. Nature genetics. 2016 06; 48(6):657-66.

Analysis

Is Analysis

False

Is Obsolete

False