DCAR_004747 | CarrotOmics Tripal4

Cds

>DCAR_004747cds ATGGACTGCTGCATCTCATACAACAAGATCTCCGCCTTCACTTCATCTTT CTCGTCTTTCTCCACCGGCCCAGTTGTGTTTCCGGGTAATCGGAGGAGGG TCATAGTTGCTGCAACAAGTAGCGACAGTCACTGTGATTTCGGCAGCTTG AATACCCCATTGGAGCTTAGGTCTCCAAGCGGGAAGCTCTTGTCAAGAGT GCTGCAGAATGACCGCAAGAACTTTCACCATGCAGTGGCTGGGCAGCTGG AGCTCTTGGTTTCTGAGCGTGATGAGGCTCTGGCTAGGTTCAGGCTGAGT CTTGGATCTTCTGATGCTTCTCTCCACAGGAGGATTGCTGAAATGAAAGA GCAGGAGTCCCAAACGGCAATTGAAGATGTTATGTATATGTTAATCTCTT ATAAGTTTTCTGAGATCAGAGTTCATTTGGTTCCAAGGCTTTCACAATGC ATATATAACGGCAGACTTGAAATTTATCCCTCAAAGGACTGGGAGCTAGA GTCTATTCACAGCTTGGAGGTTTTGGAGATGATAAAGGAACATCTGGGCG CTGTTATTGGCTGGAGAGCAGACTCGAACGTCACAAACAATTGGGCAACA ACTAATATATCAAAGCTCCGTCTCTGCCGAGTTTATGCTGCGTCAATCTT GTATGGCTACTTCCTGAAGTCTGCTTCTATGAGGCATCGCCTTGAACTGA GCCTGACTGATCTCAACTATGACCTTCGACCCAATACTGGCTCCCGTCTA TCCCTCTCAGATTTTTGGTCATATGGCTTAAATCTTGCCTTTGGTCGAGT TCAGAACAAACATGTAACCACTGTGGGTGAAGCATCATGTAACCAGGTAA AGAAAAATGAGAAATTAAGTTCCTATGTTATGGGGTTTGATCCTGAAGTG CTCCAGATGTGCGCCAAACCAAAATCAAAGGAGGCTATGAATCTTATAGA AAAGCATAGCTGTGCGCTCTTTGGTGACGAGAAGTCGGGCCTGGTAGAAT CCGATGAGGTGATATCCACGTCTCTGGCAAGCCAGAAGAGATTTGTCCTG GAGGCTGTAGCTTTTGGTTCATTTCTCTGGGACAGTGAGGAGTATGTAGA TAGTGCATATAAGCTTAAACAAAACTAA

Locus_tag

DCAR_004747

Name

DCAR_004747

Organism

Daucus carota subsp. sativus

Pep

>DCAR_004747pep MDCCISYNKISAFTSSFSSFSTGPVVFPGNRRRVIVAATSSDSHCDFGSL NTPLELRSPSGKLLSRVLQNDRKNFHHAVAGQLELLVSERDEALARFRLS LGSSDASLHRRIAEMKEQESQTAIEDVMYMLISYKFSEIRVHLVPRLSQC IYNGRLEIYPSKDWELESIHSLEVLEMIKEHLGAVIGWRADSNVTNNWAT TNISKLRLCRVYAASILYGYFLKSASMRHRLELSLTDLNYDLRPNTGSRL SLSDFWSYGLNLAFGRVQNKHVTTVGEASCNQVKKNEKLSSYVMGFDPEV LQMCAKPKSKEAMNLIEKHSCALFGDEKSGLVESDEVISTSLASQKRFVL EAVAFGSFLWDSEEYVDSAYKLKQN*

Sequence Coordinates

DCARv2_Chr1:50918633..50921310-

Type

gene

Unique Name

DCAR_004747.gene

Sequence Residues

ATGGACTGCTGCATCTCATACAACAAGATCTCCGCCTTCACTTCATCTTT
CTCGTCTTTCTCCACCGGCCCAGTTGTGTTTCCGGGTAATCGGAGGAGGG
TCATAGTTGCTGCAACAAGTAGCGACAGTCACTGTGATTTCGGCAGCTTG
AATACCCCATTGGAGCTTAGGTCTCCAAGCGGGAAGCTCTTGTCAAGAGT
GCTGCAGAATGACCGCAAGAACTTTCACCATGCAGTGGCTGGGCAGCTGG
AGCTCTTGGTTTCTGAGCGTGATGAGGCTCTGGCTAGGTTCAGGCTGAGT
CTTGGATCTTCTGATGCTTCTCTCCACAGGTTTCTTGACTCACTTCACAT
ATAAAGATTGAAGTTTTTTACATAATACTATCCTTATAGTATTTGCTATT
GTGTAATTATTTGATGTCATCTTGATTCTTTGTCTAATGTGCATATCTGT
TGATCATTTACTTTTCCCCCAATTTGTGATGAAATTTGGATATATATGTA
TATGTTGTGCAATTGGTCCTGGATGCTAGGAGGTGCTCATAGGAAACAGA
GAGGTTCCTTTTCGTATGGAGTAGTTTGTTTTAAGTTTTTTTGTTTACCT
TGTTCATTCTTGTCGATACTGAAAATTTAGGAGAACGGAAGAGAATGTAA
AAATTGTGATATTAGTATTTCGTAACAATTTTTCAGAGATTAGTAGTTGA
CTTTGCGGAAATCAGCTAAATTGGGGTAGGGGTGGGTGGATATTGTAAAG
GTTACATCTTTTTCTTTTGGAGGTAACTAACTGAAGAGGAAATTCGGAAC
TCATGCTTTTCATGTTTGTATTGTAATTTATGAATGTCCCTTCCACTATG
TATATGGTTGTTTACCATTACACTATTCTCCAAGCAGATTTTCATTTTGA
GGCTACATTTGTCACTCAACTACTTCCTGAGAGCATAGGACCTGTAAGCT
TCTGTCAGTTAAAATATCAAATGGCCTTTTGCCCTGTTATTGTAGCCTAT
TTAGCATGATTATAAGTAATAAATACCGAAATCATTATATTTCATTAGGG
CTTTCCATTGGAACACTGTTTAACTAGGCCAATTAGCGTTTAGAAGTCCT
GCACGAGAACAAAAATCATAACAGTAATTAGTCGGAACAAATGGGCAAGT
GCTAGTTTCCGTTTAAACAATTAAAAACTCTTGGTAACAAATGAGGATAT
ACTGATAACTTTATCTGCCTTGCGTTTGCGCCTTCTTTACTTTAGGTTGC
AGCCCGTGCCGGTATTTTAACACCAAGTCTTTATGCTAGTTAAGGTCTTG
TATAATGTTCAATACCTATTTAGAAAAATCCTTAACCTTACAGATCTTGT
CAATGTACGAGAATATGTCTATTCTAAGAGTCAAGTTTGTGTTACCATGC
AAACTTGTCCCCACCTACGCTGTATATGTAAATTGTTACTTATTATACAA
CTAACTGGTACACGATAATGCCTAGGATATCTTCTAATAGACCAGTGAGA
ATAGTAATCTCTTCCCCTCCAGCTTGTATATTATTCCCCTGGAACTTTGT
GATTGTATAGTGTATATGCTCATGTGCAGATTCTTGCACTATTGGGCCTT
TGTAGGTACAGATATTGGTGACAAATTATGTAAGCTATGATGTTAATGTG
GATGCTCTTTCTGGTACGGATACAGATATCAGATGGGCATGTAGTTGCAC
GAGTGGCAACTTTTTGACAAAATATTATAATCATGGACAAAGTGGTGGTG
ATAGGTAAATGAACATGGTAGGAATTGACTATCTCATGCTTGGAATTGTT
CGACCTGTGGAAACTTTTTTGTTGAAACAAGTCCATGTTTTGTATGGCTT
TGCTAATTAAAACAAGTCTGAATTCCAGGAGGATTGCTGAAATGAAAGAG
CAGGAGTCCCAAACGGCAATTGAAGATGTTATGTATATGTTAATCTCTTA
TAAGTTTTCTGAGATCAGAGTTCATTTGGTTCCAAGGCTTTCACAATGCA
TATATAACGGCAGACTTGAAATTTATCCCTCAAAGGACTGGGAGCTAGAG
TCTATTCACAGCTTGGAGGTTTTGGAGATGATAAAGGAACATCTGGGCGC
TGTTATTGGCTGGAGAGCAGACTCGAACGTCACAAACAATTGGGCAACAA
CTAATATATCAAAGCTCCGTCTCTGCCGAGTTTATGCTGCGTCAATCTTG
TATGGCTACTTCCTGAAGTCTGCTTCTATGAGGCATCGCCTTGAACTGAG
CCTGACTGATCTCAACTATGACCTTCGACCCAATACTGGCTCCCGTCTAT
CCCTCTCAGATTTTTGGTCATATGGCTTAAATCTTGCCTTTGGTCGAGTT
CAGAACAAACATGTAACCACTGTGGGTGAAGCATCATGTAACCAGGTAAA
GAAAAATGAGAAATTAAGTTCCTATGTTATGGGGTTTGATCCTGAAGTGC
TCCAGATGTGCGCCAAACCAAAATCAAAGGAGGCTATGAATCTTATAGAA
AAGCATAGCTGTGCGCTCTTTGGTGACGAGAAGTCGGGCCTGGTAGAATC
CGATGAGGTGATATCCACGTCTCTGGCAAGCCAGAAGAGATTTGTCCTGG
AGGCTGTAGCTTTTGGTTCATTTCTCTGGGACAGTGAGGAGTATGTAGAT
AGTGCATATAAGCTTAAACAAAACTAA

Sequence Length

2677

Sequence MD5 Checksum

881f399c46685186e2517cb98d3d617c

Relationship

The mRNA DCAR_004747 is a part of Gene DCAR_004747
The Genetic Marker MK005470 K2914 is located in Gene DCAR_004747

Database Reference Annotations

GFF_source:.

Publication

Iorizzo M, Ellison S, Senalik D, Zeng P, Satapoomin P, Huang J, Bowman M, Iovene M, Sanseverino W, Cavagnaro P, Yildiz M, Macko-Podgórni A, Moranska E, Grzebelus E, Grzebelus D, Ashrafi H, Zheng Z, Cheng S, Spooner D, Van Deynze A, Simon P. A high-quality carrot genome assembly provides new insights into carotenoid accumulation and asterid genome evolution.. Nature genetics. 2016 06; 48(6):657-66.

Analysis

Is Analysis

False

Is Obsolete

False