DCAR_004296 | CarrotOmics Tripal4

Cds

>DCAR_004296cds ATGGGAGCTGGAGGCCCTGAAGCTGAAGACAACCGGTGGCCACCGTGGCT CAAGCCGTTACTCCGGGAGACATTCTTCGTTCAATGCAAATTACACGCTG ATTCACACAAAAGCGAATGCAATATGTACTGTCTTGATTGCATCAATGGC CCTCTCTGTTCTCTCTGCCTCAACCATCACAGAGACCACCGTGCCATTCA GATAAGGAGATCATCGTACCATGATGTGATTAGAGTGTCGGAGATTCAAA AATATCTCGACATTACCGCTGTTCAGACCTACGTTATCAACAGCGCTAAG GTTGTTTTCTTAAATGAACGGCCGCAACCTAGGCCTGGTAAAGGCGTTAC AAATACCTGCGAAGCGTGTGAGCGTAGCCTCCTTGACTCCTTCCGTTTCT GTTCTCTCGGCTGCAAGATTGCGGGGACTTCGGGGCATTTTGTGAGGAAG AGAATGCCGGAGAAGAAGCGTAAGGCCACGGTGTGGGATATAGAAGAATC ATATGACAGCAGTGGTAGCAGCAGCCACGGACACCAGAGGGGTAATTTTG GAAATTTACGAAGTTTTAGTCCGTCAACGCCGCCGCCTACGGTGGCGAGT TTCAGAACAGCCAAGAGAAGAAAGGGCATTCCGCACAGGGCTCCGATGGG TGGACTGATCATAGATTACTAA

Locus_tag

DCAR_004296

Name

DCAR_004296

Organism

Daucus carota subsp. sativus

Pep

>DCAR_004296pep MGAGGPEAEDNRWPPWLKPLLRETFFVQCKLHADSHKSECNMYCLDCING PLCSLCLNHHRDHRAIQIRRSSYHDVIRVSEIQKYLDITAVQTYVINSAK VVFLNERPQPRPGKGVTNTCEACERSLLDSFRFCSLGCKIAGTSGHFVRK RMPEKKRKATVWDIEESYDSSGSSSHGHQRGNFGNLRSFSPSTPPPTVAS FRTAKRRKGIPHRAPMGGLIIDY*

Sequence Coordinates

DCARv2_Chr1:46596231..46597951-

Type

gene

Unique Name

DCAR_004296.gene

Sequence Residues

AGCAGACACAATAATTTATAATTTATAAAAATAAGATAAAAGAAAAAAAA
AGGGCGAGTAGGTCGGTGAGTTACTTGCTCCCAAAGGCTCAGAAACGAAG
CGGGTTCGGATCTTCTAGACTAGTATAGCAATAGTCCAAGTATTTTTGTA
TTTGGGTTCGTGTAAAGGCAGTGTTTGCTTGTGCGGATAAGAACGACCCA
CTTCTCTCTCTCACCTCCTCTCTCTCTACAAAAAGCCTTTACCCTCTCTC
TCGCCGCCTCCACTCTCAAAACCCTCAGCATTTTCTCTCCTCTCTCTCTC
AAAAAAACACAACCCACAATTCTCTCTCCCTCCCCATTCAAAAAACCCTT
GTCTTAATTCTCAGTTCATTCAAACTGGCGATCGACAATCACGAAGCCTC
TGTCCGTGACTTTAAGCTCAAACACAGACGCATCATGGTACCAATCTCAT
TTATCATTTTATCTGTTTTTTTCCAATGAACAATGCTTTTTGTTACCATT
TTGTTTTATATGTGTACTGATTGTTTTGTGTAAAATGAAGGGAGCTGGAG
GCCCTGAAGCTGAAGACAACCGGTGGCCACCGTGGCTCAAGCCGTTACTC
CGGGAGACATTCTTCGTTCAATGCAAATTACACGCTGATTCACACAAAAG
CGAATGCAATATGTACTGTCTTGATTGCATCAATGGCCCTCTCTGTTCTC
TCTGCCTCAACCATCACAGAGACCACCGTGCCATTCAGGTAACTAATTAT
TACTTCCCGTATCGAAGCATATACATATTAATTTTATATGCTTCGATGCA
ATTCATCATGTTTATAACGTGATTGTTGGAGCATTTGAGGTGTTTACATT
TTTTTACTGTGGTAATTAAGTGTGTTCATATGTTTATACTTTTTACAGAT
AAGGAGATCATCGTACCATGATGTGATTAGAGTGTCGGAGATTCAAAAAT
ATCTCGACATTACCGCTGTTCAGACCTACGTTATCAACAGCGCTAAGGTT
GTTTTCTTAAATGAACGGCCGCAACCTAGGCCTGGTAAAGGCGTTACAAA
TACCTGCGAAGCGTGTGAGCGTAGCCTCCTTGACTCCTTCCGTTTCTGTT
CTCTCGGCTGCAAGGTAATAAAATAATCCGTTTTACCAATTTACATTTTT
ACCCTTACTTCGTCATTAATGTGTTAATCACCCTGATTAATTATTCAGAT
TTGCTAGAAGTTCGAATAATGTTATCAATTTACATTTTTGCCCTTGATTA
ATGTCCTGATTATGTGATTAATTAATGTTCAGATTGCGGGGACTTCGGGG
CATTTTGTGAGGAAGAGAATGCCGGAGAAGAAGCGTAAGGCCACGGTGTG
GGATATAGAAGAATCATATGACAGCAGTGGTAGCAGCAGCCACGGACACC
AGAGGGGTAATTTTGGAAATTTACGAAGTTTTAGTCCGTCAACGCCGCCG
CCTACGGTGGCGAGTTTCAGAACAGCCAAGAGAAGAAAGGGCATTCCGCA
CAGGGCTCCGATGGGTGGACTGATCATAGATTACTAATCGTAATGTGGTT
TTACTAAAATGCCCTTCTAGTGGTACTTGTAAATAGATGCAGACAGATAT
AATGAAATAGATGGCTAAAGTCCAAATAGGAAGAAAATAAGAAAAAAAAA
TATGTTATGTTTTGAGAGGTTGAAGTTGATTAGTATTGTAGTTTTGTTAT
TGTCTAATAAGTACTGAAGA

Sequence Length

1720

Sequence MD5 Checksum

c3274c57af1483f1b28745b91e4e4d26

Relationship

The mRNA DCAR_004296 is a part of Gene DCAR_004296
The Genetic Marker MK003909 K1353 is located in Gene DCAR_004296

Database Reference Annotations

GFF_source:.

Publication

Iorizzo M, Ellison S, Senalik D, Zeng P, Satapoomin P, Huang J, Bowman M, Iovene M, Sanseverino W, Cavagnaro P, Yildiz M, Macko-Podgórni A, Moranska E, Grzebelus E, Grzebelus D, Ashrafi H, Zheng Z, Cheng S, Spooner D, Van Deynze A, Simon P. A high-quality carrot genome assembly provides new insights into carotenoid accumulation and asterid genome evolution.. Nature genetics. 2016 06; 48(6):657-66.

Analysis

Is Analysis

False

Is Obsolete

False