DCAR_000304 | CarrotOmics Tripal4

Cds

>DCAR_000304cds ATGGGAGAGGATGTAAAATTTCACATTAGTAAGTGTACATCAGAGACGTC TAAAGAGAAGAATCTCGATTTCAAGCTTAAAGTCATTGGCGGGGATATTT CATCAATTCCAGGAATTTCTGATGCTATTGAGGAAACAATACGAGATGCT ATCGCAGATTCAATTACATGGCCAGTTCGCCAAGTTATACCCATTATACC AGGGGATTATAGTTACCTAGAGTTGAAACCTGTTGGAACACTAGAGGTGA AGCTCGTACAAGCAAAGGAGCTGACGAATAAAGATATCATTGGCAAGTCC GATCCTTATGCAGTCTTATTCATACGTCCAGTGCGTAGTAGAATGAAGAC TAGCAAAGTAATTAACAACCAGTTGAATCCTATTTGGAATGAAAACTTTG ATTTTATTGTCGAAGATGAGACTACACAACACTTGACTGTAAGAGTTTTT GATGATGAGGGGGTGCAAGCTTCTGAGCTCATTGGTTGCGCTCAATTTTC TCTTAAAGAACTTGAGCCCGGCAAAGTCAAGGATGTGTGGCTGAAACTGG TCAAGGATTTGCAAATCCAAAGGGACAATAAAAACAGAGGCCAGGTGCAG TTGGAGCTACTATATTGTCCTCAGGGTACTGAAAACGCAGTTATGAATCC TTTTACACGAGACTTTAGATTAACTAAATTGGAGAAGGCTCTTAAAAGTG AACCTGATGAGAAAGAAGATACAGATCCCACGTCAGGAAAGAGAAAGGAT GTGATTCTGAGAGGAGTTCTTTCAGTGACTGTAATATCGGCAGAAGATTT GCCAGCTGTAGATCTGATGGGGAAGTCTGATCCCTTTGTCGTTCTTATAA TGAGAAAAACTGAGCAAAAACAAAAGACCAGGGTCGTACATAATTCATTG GATCCGGTGTGGAATCAAACCTTTGACTTTGTGGTGGAGGATGCTTTGCA TGATCTACTACTGGTGGAAGTCTATGATCATGACACCTTCGGAAAGGATA AGATGGGCAGAGTTGTAATGACACTCACTAGGGTGACATTAGAAGGGGAA CTCACAGAGGCTTTTCCAATAGATGGAACCAAATCAGGGAAAATAAGTTT GCATCTCAAGTGGACTTCACAGCCAATATTTCGTGATTAA

Locus_tag

DCAR_000304

Name

DCAR_000304

Organism

Daucus carota subsp. sativus

Pep

>DCAR_000304pep MGEDVKFHISKCTSETSKEKNLDFKLKVIGGDISSIPGISDAIEETIRDA IADSITWPVRQVIPIIPGDYSYLELKPVGTLEVKLVQAKELTNKDIIGKS DPYAVLFIRPVRSRMKTSKVINNQLNPIWNENFDFIVEDETTQHLTVRVF DDEGVQASELIGCAQFSLKELEPGKVKDVWLKLVKDLQIQRDNKNRGQVQ LELLYCPQGTENAVMNPFTRDFRLTKLEKALKSEPDEKEDTDPTSGKRKD VILRGVLSVTVISAEDLPAVDLMGKSDPFVVLIMRKTEQKQKTRVVHNSL DPVWNQTFDFVVEDALHDLLLVEVYDHDTFGKDKMGRVVMTLTRVTLEGE LTEAFPIDGTKSGKISLHLKWTSQPIFRD*

Sequence Coordinates

DCARv2_C10721498:768..3631+

Type

gene

Unique Name

DCAR_000304.gene

Sequence Residues

ATGGGAGAGGATGTAAAATTTCACATTAGTAAGTGTACATCAGAGACGTC
TAAAGAGGTTATCATATACATATTAGTAAGAGCACTTTTCCATAACTGGG
AACCAAACAGAGATTGTCAATTAACAAACTTATTTATAATATCAGGTTTT
GAGAAAACTAATATGCAACAAATTATACTGTTCTTGCAGAAGAATCTCGA
TTTCAAGCTTAAAGTCATTGGCGGGGATATTTCATCAATTCCAGGAATTT
CTGATGCTATTGAGGTCTTAAAATTTCTTGTTTTGCTCCTTAACATATTC
AAAAAAGTAGCAACTTCCGTATAATAATGATGCATTGACAAAAATAATCA
TACCATATCACAGAGATGACAAAATGCAGATGGTAAAATGAGATGACAAA
AATATTTGTTATTTCAATTCAGGAAACAATACGAGATGCTATCGCAGATT
CAATTACATGGCCAGTTCGCCAAGTTATACCCATTATACCAGGGGATTAT
AGGTATGGTACTCCATGAATAGCTACCTTCCTAGCAAACCCCACATTTGA
ATTTTTTCAACATTATGCTTTTGTCTCAATCTACCACTTAATGCAACACT
TTCTGCTAATATCACACATTTCTAACTTTCTCATCTTCCAAGATAACCTT
GCCATCCTTCTATCTTGAAGTATATTTTAAATATTACGAAAGAAGAGAGG
AAACTGCTTATGGTTAAGCAGATCCGTATCCGTTTGACACCCTTATTTTG
AACATGAACATTATGATAAATTTTCATTCTACCATGCCATTAACAGGCAT
CTACTCAGTTTGATGCTTATATAGTTCAAGCGATTGACCTAGACCTTAGT
CTTAATTTATGTTTCTGTTTTGTTTCAGTTACCTAGAGTTGAAACCTGTT
GGAACACTAGAGGTGAAGCTCGTACAAGCAAAGGAGCTGACGAATAAAGA
TATCATTGGCAAGTCCGATCCTTATGCAGTCTTATTCATACGTCCAGTGC
GTAGTAGAATGAAGACTAGCAAAGTAATTGTAAGTTAATTCACACCTTCC
TTGAAAACATTTGATCCTTCGCAGTTCTTGCTAATCATTATTATCTCTTG
GCTGAAGCAATTATAAAAACTCATGATCTCGGTTTAAGTTTTTTAATAAC
TAAAATTTTTATTATTTTCTCTATTTAGAACAACCAGTTGAATCCTATTT
GGAATGAAAACTTTGATTTTATTGTCGAAGATGAGACTACACAACACTTG
ACTGTAAGAGTTTTTGATGATGAGGGGGTGCAAGCTTCTGAGCTCATTGG
TTGCGCTCAATTTTCTCTTAAAGAACTTGAGCCCGGCAAAGTCAAGGATG
TGTGGCTGAAACTGGTCAAGGATTTGCAAATCCAAAGGGACAATAAAAAC
AGAGGCCAGGTAATGACTTCGCCTATGATTTTGACAATTTGTGAATATTA
TGTTAGTCCTGTTATTACTGCAAATATTATCTAATCAACTTGAACTATCA
TGAAAATGAACTAGTATGTGCATCCTTTATTTGAGACTGTTGCAATATTT
TTAACTGTACATATTATTATTATTAGACATTCTTTGCTTGTAGGTGCAGT
TGGAGCTACTATATTGTCCTCAGGGTACTGAAAACGCAGTTATGAATCCT
TTTACACGAGACTTTAGATTAACTAAATTGGAGAAGGCTCTTAAAAGTGA
ACCTGATGAGAAAGAAGATACAGATCCCACGTCAGGAAAGAGAAAGGATG
TGATTCTGAGAGGAGTTCTTTCAGTGACTGTAATATCGGCAGAAGATTTG
CCAGCTGTAGATCTGATGGGGAAGTCTGATCCCTTTGTCGTTCTTATAAT
GAGAAAAACTGAGCAAAAACAAAAGACCAGGGTAAATTTTATATATGCTA
CTCTTTCTTGAATTCAATACTAATCCAATCAGTTAGTCTCAGATAGCGAC
AGATTTTTGATAAAACCCTCAATAACTGTTCATCTACTCTAGGATAGTTT
AATCTTTTACTAAATAAATACATTATCTCGGTTGATAAGGATATATTCTT
GGTAATTTCTCGTAATTGTTTGTTAATAGAAGCGGATGCAAAATATTCTC
AAAAACAACAAAAACAAAGAAACGGCCTATTGGGCCAATGACATCTTTGT
CACTCCATATACCGGATGTCAAGGGTTCAATCATTGTCGCAGAGGGTGCG
TGACTGATGTAGAATAATTATTATTGTTCTTCATATATAACAGGTCGTAC
ATAATTCATTGGATCCGGTGTGGAATCAAACCTTTGACTTTGTGGTGGAG
GATGCTTTGCATGATCTACTACTGGTGGAAGTCTATGATCATGACACCTT
CGGAAAGGTAAACTTGCATTGCATGCTTTCTTATCTCATAGTTTCCTCAT
CTCCTAATTCACCGAAATTGCAGTAGGTTTACTTATGGCTATATATCTTA
CACAATATGGTCACCATGAACAATATCATTTTAAAATAAACTGTAGTACT
AGATTTTGGGCATAATTTTAATAAATAGTTAGAGATGGACGGTAATCCTT
CAGGTTCGGTTGCTCTGTATGCCAATCAGATCACTGAGAAATATCCCAGC
TTGATATAAATTTACAATATCGGAGTTTCTAGAAATGTCCCAACTTAATG
TAAATTTATAAAATCGGAATGTATTTCATATTTTGAGTCAGTGGTACTAA
CATAAGCTATGATTAACAGGATAAGATGGGCAGAGTTGTAATGACACTCA
CTAGGGTGACATTAGAAGGGGAACTCACAGAGGCTTTTCCAATAGATGGA
ACCAAATCAGGGAAAATAAGTTTGCATCTCAAGTGGACTTCACAGCCAAT
ATTTCGTGATTAA

Sequence Length

2863

Sequence MD5 Checksum

187f01b81adbc30ce26be983acf80e13

Relationship

The mRNA DCAR_000304 is a part of Gene DCAR_000304

Database Reference Annotations

GFF_source:.

Publication

Iorizzo M, Ellison S, Senalik D, Zeng P, Satapoomin P, Huang J, Bowman M, Iovene M, Sanseverino W, Cavagnaro P, Yildiz M, Macko-Podgórni A, Moranska E, Grzebelus E, Grzebelus D, Ashrafi H, Zheng Z, Cheng S, Spooner D, Van Deynze A, Simon P. A high-quality carrot genome assembly provides new insights into carotenoid accumulation and asterid genome evolution.. Nature genetics. 2016 06; 48(6):657-66.

Analysis

Is Analysis

False

Is Obsolete

False