DCAR_000285 | CarrotOmics Tripal4

Cds

>DCAR_000285cds ATGGGTGGTAATGGCAAACACAGATGGAAAATCTCATTCCACAGCAAATC CTCCTCCTCTTCCTCATCCTCTTTTGTATCTCAACCCCCGGTTGAATTCC TTTGCCCCATTTCGGGGAGCCTCATGTTTGAGCCTGTCATCGTCTCTTCG GGCCAGACTTTCGAAGGAACGTGTGTCCAAGTGTGCCGTGATCTTTCCTT TGTTCCGTCTTTACCTGACGGAACATTCCCTGATTTCTCCGTCCTCATTC CTAATTCTGCTCTCAAATCGAGTATTCTAACATGGTGCAAAACAGCCAAT TCTCCACCTCCCAATCCGCCTGATTACCTGGCGATCCAGTCAATTGTAAG GTCTCGAATGAAGCATCACTCGGATTCGGAGAGTGATCTGTTGAGAGGCG TGGGAGATAAGCCGCGCGTGCTTTTCTCCCACGCCGCCACCGAGATCAAC CCCCGTGTTGACCATTTCTACTCCTCTTCCAGTTCTCAAGACTCCGTGAT TGCGAATGTCACTGTCCCTGCCACGCCTCTGCTCCCTTTCGCTACTCGCC CCTCCTGTTTCTCCAATTCCGACGATTCATCATCGGAATTCGAAGCCTCG GTTTCCGAAGAATCGCAACTCATCACTCAGCTCAAGAGCGCTGACGTGTA CGATCAGGAACAAGTACTGATTAGCTTGAGGAAGAAGACTCGAATCAACG AAGAATCTAGGGTTTCGCTTTGCACTCCAAACCTATTAATCGCACTCAAA TCTTCAATTTCATCGAAATACTCAGATGTTCAAGTGAATGCAGCGGCTAC AATCGTGAATCTCTCTCTGCACAAACCGAATAAAGTGAAGATCGTACGGG CCGGGATTGTTCCGTCGCTAATCGACATTTTGAAAGGCGGCTTGCCGGAG TCACAAGAGCACGCCGCCGGCGCGTTGTTCAGCTTATCTCTCGAAGACGA CAACAAGACCGCGATCGGCGTGCTCGGCGCTCTGCCGCCGTTGCTCCACG CGCTCAGATCGGACAGTGAGCGGACTCGGAACGACTCGGCGCTGGCGCTG TATCATTTGTCGTTAATCCAGACGAACCGAGTCAAACTCGTGAAACTCGG TGCCGTGTCAACTCTGTTGACTCTGCTAAAACGCGGTGAGTTGTTGGGGA GAGTATTGCTTGTAATGTGCAATTTGGCTTTGTGTGCGGAAGGAAAGTCA ACGATGCTTGACTCCAACGCGGTGGAATGTTTGGTGCAAATTTTACGGAC CGAGTTGGAGTCCGAGTCGACTCGGGAGAATTGTGTTGCCGTGTTGTACT CGTTGAGTAGTGGGAGTTTGCGGTTCAAGGGTTTGGCCCGGGAGGTGAGA GCGGCGGAGGTTTTACGTGTCGTGGAGGAGAACGGGAGCGAGCGAGGACG AGAGAAGGCGAAACGGATGTTGATGATGTTGAGGGAACGGGACGAGGAGG CGGGAGAGGAGGTGGATTGGGAAGGGGTGCTGGAAGGTGGACTGAGTCGA TACCGAGTTGGTAGGAAGGTTACGGGTCCTAACTCAACTCAGTTTTGA

Locus_tag

DCAR_000285

Name

DCAR_000285

Organism

Daucus carota subsp. sativus

Pep

>DCAR_000285pep MGGNGKHRWKISFHSKSSSSSSSSFVSQPPVEFLCPISGSLMFEPVIVSS GQTFEGTCVQVCRDLSFVPSLPDGTFPDFSVLIPNSALKSSILTWCKTAN SPPPNPPDYLAIQSIVRSRMKHHSDSESDLLRGVGDKPRVLFSHAATEIN PRVDHFYSSSSSQDSVIANVTVPATPLLPFATRPSCFSNSDDSSSEFEAS VSEESQLITQLKSADVYDQEQVLISLRKKTRINEESRVSLCTPNLLIALK SSISSKYSDVQVNAAATIVNLSLHKPNKVKIVRAGIVPSLIDILKGGLPE SQEHAAGALFSLSLEDDNKTAIGVLGALPPLLHALRSDSERTRNDSALAL YHLSLIQTNRVKLVKLGAVSTLLTLLKRGELLGRVLLVMCNLALCAEGKS TMLDSNAVECLVQILRTELESESTRENCVAVLYSLSSGSLRFKGLAREVR AAEVLRVVEENGSERGREKAKRMLMMLRERDEEAGEEVDWEGVLEGGLSR YRVGRKVTGPNSTQF*

Sequence Coordinates

DCARv2_C10717768:1581..3628-

Type

gene

Unique Name

DCAR_000285.gene

Sequence Residues

TCTCGTTTTTTCACTATTGCACTTGGTAAACAAAAATTGATATTTTTAAG
TCGAGAGGAGAAAAGGTATGCAGTAAATAAAAAATCCAAACTAAACACAA
AATGAACGTCATCTTGTTATCGGAGATAAAACGGAGATATCATGACATCA
TGTAGCATAGTCAAATCTTGGACTTTGTCTCCTCTTAACACATATTGAAC
CAGTCTACCCCGCCCCTTTTCGCACCAGCTCCTCCAACTCAATCACATTC
CTGAAATTCTCACGATTCACAAATGGGTGGTAATGGCAAACACAGATGGA
AAATCTCATTCCACAGCAAATCCTCCTCCTCTTCCTCATCCTCTTTTGTA
TCTCAACCCCCGGTTGAATTCCTTTGCCCCATTTCGGGGAGCCTCATGTT
TGAGCCTGTCATCGTCTCTTCGGGCCAGACTTTCGAAGGAACGTGTGTCC
AAGTGTGCCGTGATCTTTCCTTTGTTCCGTCTTTACCTGACGGAACATTC
CCTGATTTCTCCGTCCTCATTCCTAATTCTGCTCTCAAATCGAGTATTCT
AACATGGTGCAAAACAGCCAATTCTCCACCTCCCAATCCGCCTGATTACC
TGGCGATCCAGTCAATTGTAAGGTCTCGAATGAAGCATCACTCGGATTCG
GAGAGTGATCTGTTGAGAGGCGTGGGAGATAAGCCGCGCGTGCTTTTCTC
CCACGCCGCCACCGAGATCAACCCCCGTGTTGACCATTTCTACTCCTCTT
CCAGTTCTCAAGACTCCGTGATTGCGAATGTCACTGTCCCTGCCACGCCT
CTGCTCCCTTTCGCTACTCGCCCCTCCTGTTTCTCCAATTCCGACGATTC
ATCATCGGAATTCGAAGCCTCGGTTTCCGAAGAATCGCAACTCATCACTC
AGCTCAAGAGCGCTGACGTGTACGATCAGGAACAAGTACTGATTAGCTTG
AGGAAGAAGACTCGAATCAACGAAGAATCTAGGGTTTCGCTTTGCACTCC
AAACCTATTAATCGCACTCAAATCTTCAATTTCATCGAAATACTCAGATG
TTCAAGTGAATGCAGCGGCTACAATCGTGAATCTCTCTCTGCACAAACCG
AATAAAGTGAAGATCGTACGGGCCGGGATTGTTCCGTCGCTAATCGACAT
TTTGAAAGGCGGCTTGCCGGAGTCACAAGAGCACGCCGCCGGCGCGTTGT
TCAGCTTATCTCTCGAAGACGACAACAAGACCGCGATCGGCGTGCTCGGC
GCTCTGCCGCCGTTGCTCCACGCGCTCAGATCGGACAGTGAGCGGACTCG
GAACGACTCGGCGCTGGCGCTGTATCATTTGTCGTTAATCCAGACGAACC
GAGTCAAACTCGTGAAACTCGGTGCCGTGTCAACTCTGTTGACTCTGCTA
AAACGCGGTGAGTTGTTGGGGAGAGTATTGCTTGTAATGTGCAATTTGGC
TTTGTGTGCGGAAGGAAAGTCAACGATGCTTGACTCCAACGCGGTGGAAT
GTTTGGTGCAAATTTTACGGACCGAGTTGGAGTCCGAGTCGACTCGGGAG
AATTGTGTTGCCGTGTTGTACTCGTTGAGTAGTGGGAGTTTGCGGTTCAA
GGGTTTGGCCCGGGAGGTGAGAGCGGCGGAGGTTTTACGTGTCGTGGAGG
AGAACGGGAGCGAGCGAGGACGAGAGAAGGCGAAACGGATGTTGATGATG
TTGAGGGAACGGGACGAGGAGGCGGGAGAGGAGGTGGATTGGGAAGGGGT
GCTGGAAGGTGGACTGAGTCGATACCGAGTTGGTAGGAAGGTTACGGGTC
CTAACTCAACTCAGTTTTGACCCACCGAGTTATGAAATTGTTATGATTCT
TAGATGTGGATGGTTAATTTATTAAATCGCGTGTCCATCATTTGTTGACG
AGATACTTGATTTGCTGATTGTTGTATATACTTTATGTTATTAGTAAATT
AGTTCGATTCGATATTTTAATGTCATTGTATAAAATTTTCAATGGTAACC
ATGAGGAATGTTTGAAATGTTCCGTTAAAGTTTTGTTTAGGTAGGTT

Sequence Length

2047

Sequence MD5 Checksum

f201b8895c002196e8b4d03a067ebf52

Relationship

The mRNA DCAR_000285 is a part of Gene DCAR_000285

Database Reference Annotations

GFF_source:.

Publication

Iorizzo M, Ellison S, Senalik D, Zeng P, Satapoomin P, Huang J, Bowman M, Iovene M, Sanseverino W, Cavagnaro P, Yildiz M, Macko-Podgórni A, Moranska E, Grzebelus E, Grzebelus D, Ashrafi H, Zheng Z, Cheng S, Spooner D, Van Deynze A, Simon P. A high-quality carrot genome assembly provides new insights into carotenoid accumulation and asterid genome evolution.. Nature genetics. 2016 06; 48(6):657-66.

Analysis

Is Analysis

False

Is Obsolete

False