DCAR_003169 | CarrotOmics Tripal4

Cds

>DCAR_003169cds ATGGATGATGGGGAGCTTGATTTTTCGAACCATGAAATGTTTGGGGGTAC GAATTTAGCTGAGATTGGTGATTTGCCTGCTAATTGCTCGATGGATAGTT TCTTTGATGAGCTTCTGAAGGATACACATGCTTGCACCCATGCTCATACT TGTAATCCACCTGGACCTGATGCTTCGCATACACACACATGTTATCATGT GCATACCAAGATTGTTCCTGCCTCGAGTGAGGATAAGGATCCTAGTGACG ATACTGCTGAGTCTGCGGATAAGAAATCGAAAAAACGGCCTGTGGGGAAC CGGGAAGCAGTGCGCAAATATCGTGAAAAGAAGAAGGCAAAGGCTGCTTC TTTAGAGGATGAAGTAATTAGATTGAGAGCTATTAATCAGCAGCTAGTGA AGAGGTTGCAGGGTCAGGCTGTGTTGGAAGCTGAAGTTGCTAGGCTCAAG TGTTTACTAGTGGATATTAGGGGAAGAATTGAAGGGGAGATTGGGGCTTT TCCATATCAGAAGCCAGCTAAGAGTGCGATTTATCAGAACCCTGGGGCTT CCAGTTTGCCTGGTGCTTATGTTATGAATCCATGTAGTAACGATCAGGTG TATTGCCTTCACCCTGGGGCAGAAAGCAGAAGTGAAGAAGATGCAGTGCT TAATGTTGAAGCCTTCAATGGTTGTGATTTTGAGAATTTACAATGTTTGG GCAATCAGAGTTCAGCCATAGATGAGCTTCCTGGATGTGGTATTTCGGGC AGTGTTCCTGCCATCAATATACCTGGTGGAAATAAGAGAAAAGCTCTACT GGTGTGGCAAAGCAGGTTAGCCTATTATGATATCTTTTCAGTTCTAGGAT CTTATTTTTTGAGGAGGTTATGGAAAACCATTTACCTTCTTTTGTTTGAT GCTCCTCGAATCCATACTGCTTTAGTGGCTTGCTGA

Locus_tag

DCAR_003169

Name

DCAR_003169

Organism

Daucus carota subsp. sativus

Pep

>DCAR_003169pep MDDGELDFSNHEMFGGTNLAEIGDLPANCSMDSFFDELLKDTHACTHAHT CNPPGPDASHTHTCYHVHTKIVPASSEDKDPSDDTAESADKKSKKRPVGN REAVRKYREKKKAKAASLEDEVIRLRAINQQLVKRLQGQAVLEAEVARLK CLLVDIRGRIEGEIGAFPYQKPAKSAIYQNPGASSLPGAYVMNPCSNDQV YCLHPGAESRSEEDAVLNVEAFNGCDFENLQCLGNQSSAIDELPGCGISG SVPAINIPGGNKRKALLVWQSRLAYYDIFSVLGSYFLRRLWKTIYLLLFD APRIHTALVAC*

Sequence Coordinates

DCARv2_Chr1:36475788..36477195+

Type

gene

Unique Name

DCAR_003169.gene

Sequence Residues

ATGGATGATGGGGAGCTTGATTTTTCGAACCATGAAATGTTTGGGGGTAC
GAATTTAGCTGAGATTGGTGATTTGCCTGCTAATTGCTCGATGGATAGTT
TCTTTGATGAGCTTCTGAAGGATACACATGCTTGCACCCATGCTCATACT
TGTAATCCACCTGGACCTGATGCTTCGCATACACACACATGTTATCATGT
GCATACCAAGATTGTTCCTGCCTCGAGTGAGGATAAGGATCCTAGTGACG
ATACTGCTGAGTCTGCGGATAAGAAATCGAAAAAACGGCCTGTGGGGAAC
CGGGAAGCAGTGCGCAAATATCGTGAAAAGAAGAAGGCAAAGGCTGCTTC
TTTAGAGGATGAAGTAATTAGATTGAGAGCTATTAATCAGCAGCTAGTGA
AGAGGTTGCAGGGTCAGGCTGTGTTGGAAGCTGAAGTTGCTAGGCTCAAG
TGTTTACTAGTGGATATTAGGGGAAGAATTGAAGGGGAGATTGGGGCTTT
TCCATATCAGAAGCCAGCTAAGAGTGCGATTTATCAGAACCCTGGGGCTT
CCAGTTTGCCTGGTGCTTATGTTATGAATCCATGTAGTAACGATCAGGTG
TATTGCCTTCACCCTGGGGCAGAAAGCAGAAGTGAAGAAGATGCAGTGCT
TAATGTTGAAGCCTTCAATGGTTGTGATTTTGAGAATTTACAATGTTTGG
GCAATCAGAGTTCAGCCATAGATGAGCTTCCTGGATGTGGTATTTCGGGC
AGTGTTCCTGCCATCAATATACCTGGTGGAAATAAGAGAAAAGGTAAAAA
ATTTGTTGCTCTCTTATGACTTAATCTTTCTGGGTTTTTTCTTTTTCATG
TAGATTGTTAGCTAGTTGCTAATAGTAATATATAGCATTGCTTGATGTAG
TATGTGCAGTTTCACTTCTGAGTTCAGTTAATAGCAAGCCTTAACATGTG
GAATATGTTCATTTTACCTGTCATATAAGAGCATGTGCATCCTTCTCGAT
GTTTTCTTAGACTAGCCACTTATTATTTTCTTAAAATCAAGTTACTCTAG
CAGACAAGCTTACCACATTGTATTCGGCATTTAGGAATTACATATTGGCA
AAAAAACATTTATCTGTGATAGTTTATTCCCCTAATTTGCTATGACATAA
GTATGTGTTATAAATTATAATCTACAAACACAATATTTTCTTGAAATATT
TAATGCAAAGACCGTTTTCTAATAGTTTATGCAGTTTCTTTTGTTTTATA
AAATGTTTTTAAAGCTCTACTGGTGTGGCAAAGCAGGTTAGCCTATTATG
ATATCTTTTCAGTTCTAGGATCTTATTTTTTGAGGAGGTTATGGAAAACC
ATTTACCTTCTTTTGTTTGATGCTCCTCGAATCCATACTGCTTTAGTGGC
TTGCTGA

Sequence Length

1407

Sequence MD5 Checksum

26397e1703faf7bae5ba1314149ca9bf

Relationship

The mRNA DCAR_003169 is a part of Gene DCAR_003169
The Genetic Marker MK005735 K3179 is located in Gene DCAR_003169

Database Reference Annotations

GFF_source:.

Publication

Iorizzo M, Ellison S, Senalik D, Zeng P, Satapoomin P, Huang J, Bowman M, Iovene M, Sanseverino W, Cavagnaro P, Yildiz M, Macko-Podgórni A, Moranska E, Grzebelus E, Grzebelus D, Ashrafi H, Zheng Z, Cheng S, Spooner D, Van Deynze A, Simon P. A high-quality carrot genome assembly provides new insights into carotenoid accumulation and asterid genome evolution.. Nature genetics. 2016 06; 48(6):657-66.

Analysis

Is Analysis

False

Is Obsolete

False