DCAR_003061 | CarrotOmics Tripal4

Cds

>DCAR_003061cds ATGAAGGCAGGAACATTTTCTTTGAATCCATATGCAGCATCATACATCCC GCTCTCCAGAAGAGGTATCTCTAATGAAAACAAGGGGTGTGAACTGACAG AAAATGCCTCTAAAACTGGAGATGAGCCTTTCGGGGACGGGTCACAGCCT GTGATTAAAACAACTCATAAGCAGTGCCAAAAGACTCCTGAAAGCTACAA TATCCAAGGTACTGTCTCTGAGGATTCTAAGTTGAAGAGTCAGACTGTTC ATGGCTCATCCTCGCTGTACCCTAATGAGATGACAGAGAAGCACAAGTGG GACGATCAGAGGGACATGGATTTGACATATCTTCAGATGACGTTTCCTGG TGTATCAGATGATTCTCTCTCTGTTGTCTATCTAGCAAATAACGGTGACC TGGATGCGACAGTCGAAATGCTTATTCAACTTGAGCTATATACAGGTGAT TCTTCTGAAAATCTTCCCGACAGTTTGGACATTGGTGATGTAGCAGAGTC AGGGACTTCAAGCCACAAACTGAAGAATGTGCCGAAGAGTGAAGTTGGAG GTTCCTCATCTGGGGGTAGTCGGCCTCTTTCAACCTAA

Locus_tag

DCAR_003061

Name

DCAR_003061

Organism

Daucus carota subsp. sativus

Pep

>DCAR_003061pep MKAGTFSLNPYAASYIPLSRRGISNENKGCELTENASKTGDEPFGDGSQP VIKTTHKQCQKTPESYNIQGTVSEDSKLKSQTVHGSSSLYPNEMTEKHKW DDQRDMDLTYLQMTFPGVSDDSLSVVYLANNGDLDATVEMLIQLELYTGD SSENLPDSLDIGDVAESGTSSHKLKNVPKSEVGGSSSGGSRPLST*

Sequence Coordinates

DCARv2_Chr1:35388108..35389900+

Type

gene

Unique Name

DCAR_003061.gene

Sequence Residues

ATGAAGGCAGGAACATTTTCTTTGAATCCATATGCAGCATCATACATCCC
GCTCTCCAGAAGAGGTATCTCTAATGAAAACAAGGGGTGTGAACTGACAG
AAAATGCCTCTAAAACTGGAGATGAGCCTTTCGGGGACGGGTCACAGCCT
GTGATTAAAACAACTCATAAGCAGTGCCAAAAGACTCCTGAAAGCTACAA
TATCCAAGGTACTGTCTCTGAGGATTCTAAGTTGAAGAGTCAGACTGTTC
ATGGCTCATCCTCGCTGTACCCTAATGAGATGACAGAGAAGCACAAGTGG
GACGATCAGAGGGACATGGATTTGACATATCTTCAGATGACGTTTCCTGG
TGTATCAGATGATTCTCTCTCTGTTGTCTATCTAGCAAATAACGGTGACC
TGGATGCGACAGTCGAAATGCTTATTCAACTTGAGGTAAAGTTGTGTTTC
TATTAAAAGTGTGTGTGAATTGTTTAATCCCCTCTTTAAGAAGTATGCTT
GTTCTTCTCTGTTACTGATGGAGACTTGATACTAGGGGGTCTCCTACCTA
TGTAGTTTGTTATTTTGTTTCATGTGCCATCATCCTAATTCGTAGATGAG
CTGTTAATCATGCTATCTTAAATGAGAAACAACAAGGATATGTTACTGGA
CCAATTAAATATAGGAGATAAGAACCTAATAAGGTTTGAAGTGGTACAAT
ATGATACTTTAGGTTGTCCAAATGAGTTGAATTGAACAAACAAGACTATG
CAGAAATAGCAAAAAAAGTTGAATAGCATATTATTGTGGAAGGTAAACAA
TATAATGTCCGAGTTTATTCTTAATAGCTCATCTAGTGAGTAGTGTCCCC
TTTATGTTAACTATTGGCAAAGTATTTCATGCCTGATTAGGTACTACCAC
CGCCACTATTACAGTAGTATTACACATAGACGCACCTGTTTGTAAATTAT
TGTGGAAGGAAACAATATAATGACCCAGTTTATTCTTAATAACTCATCTA
GTGTCTCCTTTCTGATGACAGTTAGTCCTAGAACATCCTTGGTGTTAACT
ATTGGCAAAGTACTTCATGCCTGATTAGGTACCACCACCACCACCACTAT
TACAGTATTACTACACAATACACGTAGACGCACCGGTTTGTTTTTAGTGG
AGTTGTTTGCAGAATCAATATTTGGATGTGGGATCCATTGCTTGTTCTTG
GAAAACCAGAATAAGCATTTTCTGATTCTCTTTGTCAATTTTTTTATTTT
TTTTTGAGGTAAATTTGTTTGGAATCCTGTTTATTCTTAATTCTCAAAGA
ATGTGTATTCTCTCCTACATTTGTTAGCCCTTGAAATGAGGTATGGAATC
ATGATATACTATTGCATTGCATTCTGGATAAAGCTTGCATCCTCTGCACC
ATCATTCCCCAGATACCTTCATTGCTTCTCTTCCAATGAAAAAGTTCATG
ACCCATAGTTCTTCTACTTCGGGCACCAGCGGATAGTAAATTACACACAT
GTTTGTAGCTTAGTTTATAATAGCAGATGCTTGTAATAGGGATAATGTAT
GATAGGCATTCTTATTAGATGAGGCAGTAGTGGGTAACAAATTACACATG
TTCTTGGATTTGTAGACTACTTATTCTTTCACTTTGCAGCTATATACAGG
TGATTCTTCTGAAAATCTTCCCGACAGTTTGGACATTGGTGATGTAGCAG
AGTCAGGGACTTCAAGCCACAAACTGAAGAATGTGCCGAAGAGTGAAGTT
GGAGGTTCCTCATCTGGGGGTAGTCGGCCTCTTTCAACCTAA

Sequence Length

1792

Sequence MD5 Checksum

7c337420edb33fa3eb5722a67ce0ea66

Relationship

The mRNA DCAR_003061 is a part of Gene DCAR_003061
The Genetic Marker MK007985 1_35388388 is located in Gene DCAR_003061

Database Reference Annotations

GFF_source:.

Publication

Iorizzo M, Ellison S, Senalik D, Zeng P, Satapoomin P, Huang J, Bowman M, Iovene M, Sanseverino W, Cavagnaro P, Yildiz M, Macko-Podgórni A, Moranska E, Grzebelus E, Grzebelus D, Ashrafi H, Zheng Z, Cheng S, Spooner D, Van Deynze A, Simon P. A high-quality carrot genome assembly provides new insights into carotenoid accumulation and asterid genome evolution.. Nature genetics. 2016 06; 48(6):657-66.

Analysis

Is Analysis

False

Is Obsolete

False