DCAR_020833

Cds

>DCAR_020833cds ATGGATTGTGAGAACAAGAATGTTGTGCTAGGAAACGGGCTGTGCATGCA GAAAGATCCGTTGAACTGGGGAATGGCTGCGGAGGCCTTGACAGGAAGCC ATTTGGATGAAGTCAAGAGGATGGTGGCTGAGTTTAGGAAGCCTATGGTG CAGCTTGGCGGGGAGACACTCACCGTCTCTCAGGTGGCTGCTATTGCTGC AGGGAGTGTCAAGGTTGAGTTAGCCGAGTCCGCGAGGGCTGGTGTCAAGG CTAGTAGTGATTGGGTGATGGAGAGCATGAACAAGGGAACTGATAGTTAT GGTGTTACTACTGGTTTTGGTGCTACTTCTCATAGGAGGACAAAACAAGG TGGTGCTCTGCAGAAGGAACTTATTAGATTTTTGAACGCTGGAATCTTTG GAAGTGGAAATGATTCTTCGAACATATTACCACATTCAGCAACAAGAGCA GCAATGCTAGTGAGGATCAACACACTCCTCCAAGGTTACTCTGGCATTCG ATTTGAAATTCTTGAGGCCATCACCAAGTTCCTCAACCAAAACATTACCC CTTGCTTGCCACTCCGTGGAACGATCACTGCTTCTGGTGATCTTGTCCCT TTATCCTACATTGCTGGACTTCTAACTGGCCGTCCTAATTCCAAGGCGGT TGGACCCACTGGAGAGAATCTGACTGCTGCAGAAGCATTTAAACTTGCTG GAGTTGATGGTGGATTCTTTGAGCTGCAGCCAAAAGAAGGCCTTGCACTA GTCAATGGCACAGCTGTCGGTTCTGGAATGGCTTCAATGGTACTGTTTGA GACCAATATACTTGCTGTGTTGGCTGAAGTTATGTCAGCTATCTTTGCTG AAGTGATGCAGGGCAAACCCGAATTTACTGACCATTTGACACACAAGTTG AAGCATCATCCTGGACAAATTGAAGCTGCAGCTATAATGGAACACATCTT GGATGGAAGCTCTTATGTCAAGGCTGCTGAGAAGCAACACGAAATGGATC CATTGCAAAAACCAAAGCAAGATAGATATGCTCTTAGGACATCTCCACAA TGGCTTGGACCACAGATTGAAGTGATTCGATCATCAACAAAAATGATAGA AAGGGAGATCAATTCTGTCAATGATAACCCTTTGATTGATGTGTCAAGGA ACAAGGCCATCCATGGTGGTAACTTCCAGGGTACGCCTATTGGAGTTTCT ATGGACAATACAAGGTTGGCTATTGCAGCAATTGGAAAGCTCATGTTTGC CCAATTTTCGGAGCTTGTGAATGACTTTTATAACAATGGGCTGCCATCTA ATCTCTCTGGAGGGCGTAATCCAAGTTTGGATTATGGTTTCAAGGGTGCT GAAATTGCTATGGCTTCTTACTGCTCTGAGCTACAATTTTTGGGCAATCC AGTTACCAACCATGTTCAAAGCGCTGAGCAACACAATCAAGATGTGAACT CACTAGGTTTGATCTCCTCAAGGAAAACAGCAGAAGCTGTTGAAATCTTG AAGCTCATGTCTACCACATTTTTGGTAGGCCTCTGCCAAGCTGTAGACCT GAGGCACTTGGAGGAGAACTTGAAGAGCACTGTCAAGAACACTGTAAGTC AAGTAGCCAAGAAAGTTCTAACTATGGGTGTCAATGGTGAGCTTCATCCT TCAAGATTCTGTGAGTTGGATTTGCTTAGAGTTGTTGACAGGGAGTACAT TTTCGCATACATTGACGACCCCTGCAGTGCAACCTACCCACTGATGCAAA AGCTAAGACAGGTACTAGTTGAACATGCATTGAAAAATGGCGAAACTGAG AAGAACTTGAGCACCTCAATCTTCCAAAAGATTGCAGCTTTTGAAGATGA ATTGAAGGCCCTTTTACCCAAGGAGGTTGAAAGTGCAAGGGCTGTGGTAG AGAGTGGAAATCCTGCTATTCCAAACAGGATCAAAGAATGCAGGTCTTAT CCACTGTACAAGTTTATCAGGGAAGAGCTGGGAACAGTTTATTTAACTGG CGAGAAAGTGACATCGCCTGGAGAAGAGTTTGACAAGGTGTTCACCGCAA TGTCCAAAGGAGAGATCATTGATCCATTGTTGGCGTGTCTTGAGAGCTGG AATGGTGCTCCTCTTCCAATTGCTTAG

Gene

PAL-1

Locus_tag

DCAR_020833

Name

DCAR_020833

Organism

Daucus carota subsp. sativus

Pep

>DCAR_020833pep MDCENKNVVLGNGLCMQKDPLNWGMAAEALTGSHLDEVKRMVAEFRKPMV QLGGETLTVSQVAAIAAGSVKVELAESARAGVKASSDWVMESMNKGTDSY GVTTGFGATSHRRTKQGGALQKELIRFLNAGIFGSGNDSSNILPHSATRA AMLVRINTLLQGYSGIRFEILEAITKFLNQNITPCLPLRGTITASGDLVP LSYIAGLLTGRPNSKAVGPTGENLTAAEAFKLAGVDGGFFELQPKEGLAL VNGTAVGSGMASMVLFETNILAVLAEVMSAIFAEVMQGKPEFTDHLTHKL KHHPGQIEAAAIMEHILDGSSYVKAAEKQHEMDPLQKPKQDRYALRTSPQ WLGPQIEVIRSSTKMIEREINSVNDNPLIDVSRNKAIHGGNFQGTPIGVS MDNTRLAIAAIGKLMFAQFSELVNDFYNNGLPSNLSGGRNPSLDYGFKGA EIAMASYCSELQFLGNPVTNHVQSAEQHNQDVNSLGLISSRKTAEAVEIL KLMSTTFLVGLCQAVDLRHLEENLKSTVKNTVSQVAKKVLTMGVNGELHP SRFCELDLLRVVDREYIFAYIDDPCSATYPLMQKLRQVLVEHALKNGETE KNLSTSIFQKIAAFEDELKALLPKEVESARAVVESGNPAIPNRIKECRSY PLYKFIREELGTVYLTGEKVTSPGEEFDKVFTAMSKGEIIDPLLACLESW NGAPLPIA*

Sequence Coordinates

DCARv2_Chr6:27931911..27935025+

Type

gene

Unique Name

DCAR_020833.gene

Sequence Residues

AAGATTACTCATTTCTCACCAACCCTTGTTATTTTGAAGTCTCTGTTTCA
TACGAAGACCACGTCTCAAAAAATCTCAGCCCTTAATTATCTTGTAAATC
TAATGGCTGAAATCAATCTCCAACCATCCAACTACCTCACCTTTGTTTTC
TTGGCTAACTCACCTTCGTAGCATTCACCTACCCAATACAAAAAGGATGT
TTAAAAATAAAAATAAATAAAAGAAAAAGTAATGTACACTGCTCCACAAG
TCTTCCTAGCTTACCAACTAATTATAACGTTGTCTATATAAACCAAGTGC
ATTGCCTATCAATACTCAGGAATTTGGTTGGTATTCTCCCATACACATAA
CCATCCAACTTCCCCATACACAAAACACATCAAAATTTTAAAATCATATC
AAACACTTAGCTAAAAATGGATTGTGAGAACAAGAATGTTGTGCTAGGAA
ACGGGCTGTGCATGCAGAAAGATCCGTTGAACTGGGGAATGGCTGCGGAG
GCCTTGACAGGAAGCCATTTGGATGAAGTCAAGAGGATGGTGGCTGAGTT
TAGGAAGCCTATGGTGCAGCTTGGCGGGGAGACACTCACCGTCTCTCAGG
TGGCTGCTATTGCTGCAGGGAGTGTCAAGGTTGAGTTAGCCGAGTCCGCG
AGGGCTGGTGTCAAGGCTAGTAGTGATTGGGTGATGGAGAGCATGAACAA
GGGAACTGATAGTTATGGTGTTACTACTGGTTTTGGTGCTACTTCTCATA
GGAGGACAAAACAAGGTGGTGCTCTGCAGAAGGAACTTATTAGGTGAGTT
TTATTTTTATGTTTTTAGAAATGATTTTGTTAATAGTATGTGATTATGAC
CTGACAATCTTGGAAACAAATATTTATTTTTCTTGATTCAGTACTATTTT
TGTGAGGGAATAAAATTGAATGTATGTTTGTTTTGGTTGATAGACTTCAC
TCTTTGGTTGATAATTATTCTCTATCTCATAATATGCCTACTCTTTGATA
CAAATATAGACAGTTGGGTGATAATACCTACCAAGAGAGGAATACTAGTA
TTAGCTTAGCCACAACTTTTGTCAAAAACAAAATATAAATATTTATTCCT
AAAAAAATACAGGAAAAAGTGAATTTGTCTAAATTAACTTTTGCAAACAA
AACAGAGTATAATAGACTAGTATTGACTCTTCAATGATGTTGATATAAAA
CTTCAGAACAATATTAATTCAAAGGAAATGAAAATAATGTTTGGTCAGTT
TAGCAGTTCTGTGGTATTTCTCTTGATCATAGAACTTGTGGCTAATCATT
TTTAAATATGATAACAGATTTTTGAACGCTGGAATCTTTGGAAGTGGAAA
TGATTCTTCGAACATATTACCACATTCAGCAACAAGAGCAGCAATGCTAG
TGAGGATCAACACACTCCTCCAAGGTTACTCTGGCATTCGATTTGAAATT
CTTGAGGCCATCACCAAGTTCCTCAACCAAAACATTACCCCTTGCTTGCC
ACTCCGTGGAACGATCACTGCTTCTGGTGATCTTGTCCCTTTATCCTACA
TTGCTGGACTTCTAACTGGCCGTCCTAATTCCAAGGCGGTTGGACCCACT
GGAGAGAATCTGACTGCTGCAGAAGCATTTAAACTTGCTGGAGTTGATGG
TGGATTCTTTGAGCTGCAGCCAAAAGAAGGCCTTGCACTAGTCAATGGCA
CAGCTGTCGGTTCTGGAATGGCTTCAATGGTACTGTTTGAGACCAATATA
CTTGCTGTGTTGGCTGAAGTTATGTCAGCTATCTTTGCTGAAGTGATGCA
GGGCAAACCCGAATTTACTGACCATTTGACACACAAGTTGAAGCATCATC
CTGGACAAATTGAAGCTGCAGCTATAATGGAACACATCTTGGATGGAAGC
TCTTATGTCAAGGCTGCTGAGAAGCAACACGAAATGGATCCATTGCAAAA
ACCAAAGCAAGATAGATATGCTCTTAGGACATCTCCACAATGGCTTGGAC
CACAGATTGAAGTGATTCGATCATCAACAAAAATGATAGAAAGGGAGATC
AATTCTGTCAATGATAACCCTTTGATTGATGTGTCAAGGAACAAGGCCAT
CCATGGTGGTAACTTCCAGGGTACGCCTATTGGAGTTTCTATGGACAATA
CAAGGTTGGCTATTGCAGCAATTGGAAAGCTCATGTTTGCCCAATTTTCG
GAGCTTGTGAATGACTTTTATAACAATGGGCTGCCATCTAATCTCTCTGG
AGGGCGTAATCCAAGTTTGGATTATGGTTTCAAGGGTGCTGAAATTGCTA
TGGCTTCTTACTGCTCTGAGCTACAATTTTTGGGCAATCCAGTTACCAAC
CATGTTCAAAGCGCTGAGCAACACAATCAAGATGTGAACTCACTAGGTTT
GATCTCCTCAAGGAAAACAGCAGAAGCTGTTGAAATCTTGAAGCTCATGT
CTACCACATTTTTGGTAGGCCTCTGCCAAGCTGTAGACCTGAGGCACTTG
GAGGAGAACTTGAAGAGCACTGTCAAGAACACTGTAAGTCAAGTAGCCAA
GAAAGTTCTAACTATGGGTGTCAATGGTGAGCTTCATCCTTCAAGATTCT
GTGAGTTGGATTTGCTTAGAGTTGTTGACAGGGAGTACATTTTCGCATAC
ATTGACGACCCCTGCAGTGCAACCTACCCACTGATGCAAAAGCTAAGACA
GGTACTAGTTGAACATGCATTGAAAAATGGCGAAACTGAGAAGAACTTGA
GCACCTCAATCTTCCAAAAGATTGCAGCTTTTGAAGATGAATTGAAGGCC
CTTTTACCCAAGGAGGTTGAAAGTGCAAGGGCTGTGGTAGAGAGTGGAAA
TCCTGCTATTCCAAACAGGATCAAAGAATGCAGGTCTTATCCACTGTACA
AGTTTATCAGGGAAGAGCTGGGAACAGTTTATTTAACTGGCGAGAAAGTG
ACATCGCCTGGAGAAGAGTTTGACAAGGTGTTCACCGCAATGTCCAAAGG
AGAGATCATTGATCCATTGTTGGCGTGTCTTGAGAGCTGGAATGGTGCTC
CTCTTCCAATTGCTTAGTTAAGATATGATGTGATTCTAACTTATGTTATT
TCAAGTATTGGTGT

Sequence Length

3114

Sequence MD5 Checksum

dac9dff4f8b75e245c421f085a578923

Relationship

The mRNA DCAR_020833 is a part of Gene DCAR_020833
The Genetic Marker MK018568 6_27933473 is located in Gene DCAR_020833
The Genetic Marker MK002698 K0142 is located in Gene DCAR_020833

Database Reference Annotations

GFF_source:.

Publication

Iorizzo M, Ellison S, Senalik D, Zeng P, Satapoomin P, Huang J, Bowman M, Iovene M, Sanseverino W, Cavagnaro P, Yildiz M, Macko-Podgórni A, Moranska E, Grzebelus E, Grzebelus D, Ashrafi H, Zheng Z, Cheng S, Spooner D, Van Deynze A, Simon P. A high-quality carrot genome assembly provides new insights into carotenoid accumulation and asterid genome evolution.. Nature genetics. 2016 06; 48(6):657-66.

Analysis

Is Analysis

False

Is Obsolete

False