DCAR_012986 | CarrotOmics Tripal4

Cds

>DCAR_012986cds ATGATGCTAGGTTGTTCTAAGGTGTACATATCTGAAAGCCGAAACAAGGC TGCATTGGCCTCGATTGAACAAGCTGTCAAGCAATTTCCGGAGGCTGTTA TTATTAATAAGTTTGAGGATGATACGTATAACAGGGTTGGGTATACCCTT GTCTCTAAATTGGCTCCAGTGACATCGTTGGACTCGTGTCCCTTGAAGAA TGCTGTGTTTGCGATGGTGAAAGCTGCTTTTGATGCTATTGACCTTGGCC TGCACCAAGGGAGTCATCCGCGGCTTGGTGTCGTGGATCATATATGTTTT CACCCCTTGGCCTCTTCTACACTTGATCAAATTGCGGGAACTGCAAAATC TGTGGCGGCTGAGGTTGGCTTAAGGCTTCAAGTCCCCACTTTCTTATATG GAGCAGCTCATGAGGAGGGAAAATCACTTGATTCTATCCGGAGGGATTTG GGGTATTTCAAGCCTAATCTTGGTGGAAACCTGTGGGCAGGTGGCCTGCA GTCAAATGTTCTGCCCCTGAAGCCAGATGAAGGTCCAACTGAAGCAATTG AAGCAAAAGGAGTAGTTGTAATTGGGGCTACTAGATGGGTTGATAACTAC AATATCCCGGTCCTCTCTGGTGATATTGCAACTGTTCGTAGAATTGCCAA GAGAGTAAGTGGAAGAGGAGGTGGCCTTCCTTCGGTGCAATCTATGGCAC TTGTTCACGGTGATGTAACAGAGGTGGCTTGTAACTTGTTGGAGCCGACC AAAGTTGGTGGCACTCAAGTTCAGCATGAAGTAGAGGCACTTGCAGGGGA AGAGGGTGTGGCAGTTGGGAAGGGATATTTCACTGATTTTTCACAGGAAC AGATTATTGAAAATTATTTGAAACTAGGTTATCATTGA

Locus_tag

DCAR_012986

Name

DCAR_012986

Organism

Daucus carota subsp. sativus

Pep

>DCAR_012986pep MMLGCSKVYISESRNKAALASIEQAVKQFPEAVIINKFEDDTYNRVGYTL VSKLAPVTSLDSCPLKNAVFAMVKAAFDAIDLGLHQGSHPRLGVVDHICF HPLASSTLDQIAGTAKSVAAEVGLRLQVPTFLYGAAHEEGKSLDSIRRDL GYFKPNLGGNLWAGGLQSNVLPLKPDEGPTEAIEAKGVVVIGATRWVDNY NIPVLSGDIATVRRIAKRVSGRGGGLPSVQSMALVHGDVTEVACNLLEPT KVGGTQVQHEVEALAGEEGVAVGKGYFTDFSQEQIIENYLKLGYH*

Sequence Coordinates

DCARv2_Chr4:33763117..33764885-

Type

gene

Unique Name

DCAR_012986.gene

Sequence Residues

ATGATGCTAGGTTGTTCTAAGGTGTACATATCTGAAAGCCGAAACAAGGC
TGCATTGGCCTCGATTGAACAAGCTGTCAAGCAATTTCCGGAGGCTGTTA
TTATTAATAAGTTTGAGGATGATACGTATAACAGGGTTGGGTATACCCTT
GTCTCTAAATTGGCTCCAGTGACATCGTTGGACTCGTGTCCCTTGAAGAA
TGCTGTGTTTGCGATGGTGAAAGCTGCTTTTGATGCTATTGACCTTGGCC
TGCACCAAGGGAGTCATCCGCGGCTTGGTGTCGTGGATCATATATGTTTT
CACCCCTTGGCCTCTTCTACACTTGATCAAATTGCGGGAACTGCAAAATC
TGTGGCGGCTGAGGTTGGCTTAAGGCTTCAAGGTTTGTTTTATTGATTAT
GAAGTTACTACTGTTTGCATATGTTTATGTACTTTAAAAGATATCTGTTT
AGTAATTAGTAATCGCGAATTATACTATATACTTTGAAAGTAAAGTGGAT
GATAGGTATAAACAAACTATGATCTGTGTAGCAAATTCCCGATAGATTTG
CTGAATTTTTTGAACTTCAAGGTACAATGGAACACTGCTACCTGCTCGCT
ATAAGAAATACATAAAACTATGAAAAGTTTCTGATGAATTACTCACTTTT
GTTTCGTTATACTTGTTTAATAGCTTTCTACTTTAGTACTTTACAATTTG
AAACTTTCAAGTAGTTTTTTACACAGGGTACAAATTGTCCCTTATTTAAC
AATATTAAAGGTATTCTTACTTGTTCTGTGCAAAGGATATGAAATTCATG
CACTATTCTGTTATCTCAAGGCATTGTTCTAGAGAAGATCCTCAAGTTTT
GCCTCTAAAAATACAATGTATGAATAATTGTAAATCATGGTCAATTGTGG
AAGAGCTGTTTCTACTTTAATGTCATCGGGAAGTAAAGAATCTGTTAAAA
TTTTGATAGAACTACAAACTAAGTAGTGTCTATTGTTTCTGTGTGATAAT
ATTGACTATTCTTCTTTTCTTCCTTTCTTTTTTTCTTCTACGAAATTGAT
GTTTCCAAAAGTGCATGAAATGTGCAGAGTGTTATAGCATGTTTGGTGTT
TAACTTGTGATATATCACTTCACTTCTGAGGTCACTTGTTCACTTCTTCC
CCGACCCCCTATCCTTCGTCCTTTGGCACAAGACGGAATATTTGAAAATA
ATTTGTCAGTCTTTTAACTAGTGAAAATTGAATTTGTCCTGCATTCATAT
GTGGCCATACAGTCCCCACTTTCTTATATGGAGCAGCTCATGAGGAGGGA
AAATCACTTGATTCTATCCGGAGGGATTTGGGGTATTTCAAGCCTAATCT
TGGTGGAAACCTGTGGGCAGGTGGCCTGCAGTCAAATGTTCTGCCCCTGA
AGCCAGATGAAGGTCCAACTGAAGCAATTGAAGCAAAAGGAGTAGTTGTA
ATTGGGGCTACTAGATGGGTTGATAACTACAATATCCCGGTCCTCTCTGG
TGATATTGCAACTGTTCGTAGAATTGCCAAGAGAGTAAGTGGAAGAGGAG
GTGGCCTTCCTTCGGTGCAATCTATGGCACTTGTTCACGGTGATGTAACA
GAGGTGGCTTGTAACTTGTTGGAGCCGACCAAAGTTGGTGGCACTCAAGT
TCAGCATGAAGTAGAGGCACTTGCAGGGGAAGAGGGTGTGGCAGTTGGGA
AGGGATATTTCACTGATTTTTCACAGGAACAGATTATTGAAAATTATTTG
AAACTAGGTTATCATTGA

Sequence Length

1768

Sequence MD5 Checksum

5923cb2bb4f31422f4027f35a26d453a

Relationship

The mRNA DCAR_012986 is a part of Gene DCAR_012986
The Genetic Marker MK002710 K0154 is located in Gene DCAR_012986

Database Reference Annotations

GFF_source:.

Publication

Iorizzo M, Ellison S, Senalik D, Zeng P, Satapoomin P, Huang J, Bowman M, Iovene M, Sanseverino W, Cavagnaro P, Yildiz M, Macko-Podgórni A, Moranska E, Grzebelus E, Grzebelus D, Ashrafi H, Zheng Z, Cheng S, Spooner D, Van Deynze A, Simon P. A high-quality carrot genome assembly provides new insights into carotenoid accumulation and asterid genome evolution.. Nature genetics. 2016 06; 48(6):657-66.

Analysis

Is Analysis

False

Is Obsolete

False