DCAR_013910 | CarrotOmics Tripal4

Cds

>DCAR_013910cds ATGATGATGATGATGTTCAAAAATCCGCAGAAACTAGTGGTGCAGATAAC GAGAAAGGTTATGGATCTCGAATGGCGTCTCCTCCTCCTCCTTCTCCTGC CTCTCTCTCTCATCGTCTTCGTCTCTCTCTCGACGACATCATCTCTCTCG TCTCTCTCGATATTCGGCGGCAACTCAACTCGCGAAAACGACGCTGCCTC GTCGCCAAGACATCCGTACGTTAACTTCGTGGAGTCGCTGAAGAACAGGA GAGACGAGAAGCGCAAGGCCGAGTTGGACCGGTCGAGAATCGCGGTGTGC TTGGTTGGGGGAGCGCGGCGGTTCGAGCTGACCGGAGAGTCGATTGTGGA GAAGATACTGAAGGTTTATCCGAGCTCTGATCTCTTTTTGCACAGTCCGT TGGATCAGAATTCGTATAAGCTGTCGATTTTGAAAGACGCGCCGAGAATC GCCGCGGTGAAGATTTTTAAACAGGAGCGTGTTCCAGAGACTGAGTCACA GGTCCGAGTTTTAACCGCGGACAACTCACCAAACGGTATACAGGGGCTGC TGCAGTACTTTAATCTGGTAGAAGGATGCATCACTCTGATCAGATCATAT CAGGCCCAAAAGAATTTTACCTACGACTGGATAGTCCGAACCAGAGTCGA CGGCTACTGGTCTTCCCCGTTAAGCCCTGATAATTTCCTAAAGGGTCAGT ATGTGGTTCCACCAGGCTCATCTTATGGTGGCCTTAATGACCGTTTTGGC GCTGGCGATTTCGACTCATCGGTTGTGGCTCTGTCTCGCCTCTCTTTAAT CCCTGAACTCAATTCCTCTGGCTTTTATCAACTCAACTCAGAACGAGCCT TCAAGGCCCAGCTTACTGTCAGAAAAATTCCCTACCCATTTAAACGCCTC CCCCTCTCNNNNNNNNNNNNNNNNNNNNNNNNCCCTACACATTTAAACGC CTACCCTTCTGCATTGTTACTGACCGCCGCTATGATTATCCTCCAGCTCG TTTTGGAGTCCCAGTGGCAGCATTGTCCAGCCATGGACCGCTCAGCGGCG CGAAGTGCAGGCCATGCACAGTTTGGGGAGTGGGAAACCGGGTGGCAGAG ACTATTTGATAGGACTGCTGGAAAGAAGTTGGCGGCGGTGAGGAAGAGAG CGGAGGTCTTGAAAGTGAAGGAATGTGTAGCTAACTTTGAGGATATGAGG CGGAGGTCGGCCATCTGGGAAGCTCCACCACCGTTAAATATTTGCGAGTT AGGACTGAGTACAAAGTCATAA

Locus_tag

DCAR_013910

Name

DCAR_013910

Organism

Daucus carota subsp. sativus

Pep

>DCAR_013910pep MMMMMFKNPQKLVVQITRKVMDLEWRLLLLLLLPLSLIVFVSLSTTSSLS SLSIFGGNSTRENDAASSPRHPYVNFVESLKNRRDEKRKAELDRSRIAVC LVGGARRFELTGESIVEKILKVYPSSDLFLHSPLDQNSYKLSILKDAPRI AAVKIFKQERVPETESQVRVLTADNSPNGIQGLLQYFNLVEGCITLIRSY QAQKNFTYDWIVRTRVDGYWSSPLSPDNFLKGQYVVPPGSSYGGLNDRFG AGDFDSSVVALSRLSLIPELNSSGFYQLNSERAFKAQLTVRKIPYPFKRL PLXXXXXXXXXPTHLNAYPSALLLTAAMIILQLVLESQWQHCPAMDRSAA RSAGHAQFGEWETGWQRLFDRTAGKKLAAVRKRAEVLKVKECVANFEDMR RRSAIWEAPPPLNICELGLSTKS*

Sequence Coordinates

DCARv2_Chr4:26447963..26450790+

Type

gene

Unique Name

DCAR_013910.gene

Sequence Residues

ATGATGATGATGATGTTCAAAAATCCGCAGAAACTAGTGGTGCAGATAAC
GAGAAAGGTTATGGATCTCGAATGGCGTCTCCTCCTCCTCCTTCTCCTGC
CTCTCTCTCTCATCGTCTTCGTCTCTCTCTCGACGACATCATCTCTCTCG
TCTCTCTCGATATTCGGCGGCAACTCAACTCGCGAAAACGACGCTGCCTC
GTCGCCAAGACATCCGTACGTTAACTTCGTGGAGTCGCTGAAGAACAGGA
GAGACGAGAAGCGCAAGGCCGAGTTGGACCGGTCGAGAATCGCGGTGTGC
TTGGTTGGGGGAGCGCGGCGGTTCGAGCTGACCGGAGAGTCGATTGTGGA
GAAGATACTGAAGGTTTATCCGAGCTCTGATCTCTTTTTGCACAGTCCGT
TGGATCAGAATTCGTATAAGCTGTCGATTTTGAAAGACGCGCCGAGAATC
GCCGCGGTGAAGATTTTTAAACAGGAGCGTGTTCCAGAGACTGAGTCACA
GGTCCGAGTTTTAACCGCGGACAACTCACCAAACGGTATACAGGTATTAT
CATCTCAATTCTGGAGAATTTCTGTTGAATTCTGTTTGGTTGTTGGAAAA
TTTAAATTAAATTAGTTGATAAAAACATGATAATTAGATACTGTTTGATG
CATAACTGGTTACCAGAAAGGAAACGTAATGCTAAAAAAGGAAGCAGCTG
TGATTTTTTTCCATTTAGCTGAGCTGTGTTTGGCCAATGAGATGAGAAGA
TGATGATCTTTATCTTATCTACGGCTTTTGTCGATATACTGTAAGGATGA
GTTTTCGTTTTCACTAGCCCTTGTGTCACACATTTGCGCCAATGCCTGAT
CTAGAATTTCTTACCTCATTTTAATTTCCCCTACAAATTTCTGGATTTTT
ATATTCGGTAGAAAATATTAAGAAAAAAATCAGTGAAAAAATTAGAGGTA
GCTATGATGTGGATGAGAAGATAGATAGTGGTTGCTTGCACTTGATACTG
TCGAGGTAATTATGGGGTCAAGTGATCATTTTGGTAGAGTTTGTTGGCCT
TTTGATTGATTATGATTATGACAATCTATCTATATTGGTGGCCATATGAA
ACCTACTGTATATGTTAGTAGTTTTTTTATATTGTTTTAGAGAAGATGTT
ACTTGAATCATAAATGTAGAAGAATGGTTTCACAAGTACATAGCACGTTT
AAAGATTTTACTTTATGCTCCCATACATTATTTACTCACGAAGAATGTAA
GTGTAGAGATGTAGGTCCAGTCTTGTTAGTTCTGATAATGTTGGCAGGTG
TTTGTGGCATGCATGCTTATGGTAGGTACTCACTGCTCATGGGATACATA
TGATTGTTCTCGCCTTGTTGAACTTGCATCACTCACTCTTTCAGTGTTTT
ACAACCAATATGTTTGCAGAACACCGTTGAGGTAGATTATAGTAAATAAT
TGAAACATTCCACGTCGGGCTTTTATAAGCACAGGCAAGCAATGAATATA
TACCGATTTGCTAGATATGAATCTAGTTGTGGGGTTGAGATGTTATAATA
ATAATAATTTATTTTGAGTTGTAATAATAGTAATTTATACCCAGCGTAAA
GAATGTCTGACTTACGTATAAAATAAATTTTACTGTTCATATTATCACTA
TCTCAGTATTGCCAGGAGCATTATATTATTGATTTGAGATAGAAGTAGTA
GTATTATATTTGCCAAGAACAAGAGCGTGACAGAGGTTGTTTTGATTTGG
AGGCCTAACGACCTAACTAAACTCAGCCTTCTATCTTGGATGTGAAAGCC
AGAGAGATACTTATTGATTATATAGTCATTATAAAATTAATGTTATCCAT
GTTTATCATTTATCGGGTTATATAAAAGTCAGGGTTAGGTGATTTTTTGA
TGGTAAAGAAGTAGATTAAATATAGAAATGTGCTTAGGTTTGACCTCGTC
TCTTGTATTAAAAAATGGCAATTTAATGATTTATACTTTTTCTTCAGGGG
CTGCTGCAGTACTTTAATCTGGTAGAAGGATGCATCACTCTGATCAGATC
ATATCAGGCCCAAAAGAATTTTACCTACGACTGGATAGTCCGAACCAGAG
TCGACGGCTACTGGTCTTCCCCGTTAAGCCCTGATAATTTCCTAAAGGGT
CAGTATGTGGTTCCACCAGGCTCATCTTATGGTGGCCTTAATGACCGTTT
TGGCGCTGGCGATTTCGACTCATCGGTTGTGGCTCTGTCTCGCCTCTCTT
TAATCCCTGAACTCAATTCCTCTGGCTTTTATCAACTCAACTCAGAACGA
GCCTTCAAGGCCCAGCTTACTGTCAGAAAAATTCCCTACCCATTTAAACG
CCTCCCCCTCTCNNNNNNNNNNNNNNNNNNNNNNNNCCCTACACATTTAA
ACGCCTACCCTTCTGCATTGTTACTGACCGCCGCTATGATTATCCTCCAG
CTCGTTTTGGAGTCCCAGTGGCAGCATTGTCCAGCCATGGACCGCTCAGC
GGCGCGAAGTGCAGGCCATGCACAGTTGTTAGTTCTGGGCCGGATGTGGG
CAATGTGATGAGTAAACTTGACAGGGGTTGGAGCTGGACAGAGTGGGCTA
ATGGAACAATGGATCTCTGTGATGCTAGTGGGGAGTGGGAAACCGGGTGG
CAGAGACTATTTGATAGGACTGCTGGAAAGAAGTTGGCGGCGGTGAGGAA
GAGAGCGGAGGTCTTGAAAGTGAAGGAATGTGTAGCTAACTTTGAGGATA
TGAGGCGGAGGTCGGCCATCTGGGAAGCTCCACCACCGTTAAATATTTGC
GAGTTAGGACTGAGTACAAAGTCATAA

Sequence Length

2827

Sequence MD5 Checksum

2d916898c3a7c452b5e0db90187dda02

Relationship

The mRNA DCAR_013910 is a part of Gene DCAR_013910
The Genetic Marker MK001095 GSSR-096 is adjacent to Gene DCAR_013910

Database Reference Annotations

GFF_source:.

Publication

Iorizzo M, Ellison S, Senalik D, Zeng P, Satapoomin P, Huang J, Bowman M, Iovene M, Sanseverino W, Cavagnaro P, Yildiz M, Macko-Podgórni A, Moranska E, Grzebelus E, Grzebelus D, Ashrafi H, Zheng Z, Cheng S, Spooner D, Van Deynze A, Simon P. A high-quality carrot genome assembly provides new insights into carotenoid accumulation and asterid genome evolution.. Nature genetics. 2016 06; 48(6):657-66.

Analysis

Is Analysis

False

Is Obsolete

False